User:Jose Fabricio Lopez/Notebook/GEDF/2012/10/11: Difference between revisions

From OpenWetWare
Jump to navigationJump to search
No edit summary
 
(One intermediate revision by the same user not shown)
Line 13: Line 13:
===Loogbook===
===Loogbook===
*VOCs collected, not measured yet.
*VOCs collected, not measured yet.
*Plants were measured.
*Plants were dried 72°C 4 hrs and measured.
{| {{table}}
{| {{table}}
| align="center" style="background:#f0f0f0;"|
| align="center" style="background:#f0f0f0;"|
Line 43: Line 43:
*TotalW T.at:    5.74gr
*TotalW T.at:    5.74gr
We need a bigger sample.
We need a bigger sample.
==Intergenic sequences in T.atroviride==
==Intergenic sequences in T.atroviride==
====Things to do====
====Things to do====
 
*Compare Coordinates of augustus pred with .gtf.
====Things done====
====Things done====
 
*Comparing.
===Loogbook===
===Loogbook===
*As I can see and the results shows, prediction with JGI vs 454 is indifferent.


==Extras==
==Extras==


<!-- ##### DO NOT edit below this line unless you know what you are doing. ##### -->
<!-- ##### DO NOT edit below this line unless you know what you are doing. ##### -->

Latest revision as of 21:57, 11 October 2012

Gene Expression and Development in Fungi <html><img src="http://openwetware.org/images/9/94/Report.png" border="0" /></html> Main project page
<html><img src="/images/c/c3/Resultset_previous.png" border="0" /></html>Previous entry<html>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</html>Next entry<html><img src="/images/5/5c/Resultset_next.png" border="0" /></html>

Trichoderma & P. vulgaris interaction

Things to do

Things done

  • Collected.

Loogbook

  • VOCs collected, not measured yet.
  • Plants were dried 72°C 4 hrs and measured.
B.L S.L W.L W.S
C1 5 3 1.12gr .61gr
C2 5 2 .87gr .49gr
C3 5 2 1.2gr .71gr
T1 6 3 1.22gr .75gr
T2 6 3 .98gr .53gr
T3 6 3 1.28gr 1.04gr
  • TotalW Control: 4.99gr
  • TotalW T.at: 5.74gr

We need a bigger sample.

Intergenic sequences in T.atroviride

Things to do

  • Compare Coordinates of augustus pred with .gtf.

Things done

  • Comparing.

Loogbook

  • As I can see and the results shows, prediction with JGI vs 454 is indifferent.

Extras