Difference between revisions of "User:Jose Fabricio Lopez/Notebook/GEDF/2012/10/11"

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(Intergenic sequences in T.atroviride)
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==Intergenic sequences in T.atroviride==
 
==Intergenic sequences in T.atroviride==
 
====Things to do====
 
====Things to do====
 
+
*Compare Coordinates of augustus pred with .gtf.
 
====Things done====
 
====Things done====
 
+
*Comparing.
 
===Loogbook===
 
===Loogbook===
 +
*As I can see and the results shows, prediction with JGI vs 454 is indifferent.
  
 
==Extras==
 
==Extras==
  
 
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Revision as of 17:54, 11 October 2012

Fungi.jpg Gene Expression and Development in Fungi <html><img src="http://openwetware.org/images/9/94/Report.png" border="0" /></html> Main project page
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Trichoderma & P. vulgaris interaction

Things to do

Things done

  • Collected.

Loogbook

  • VOCs collected, not measured yet.
  • Plants were measured.
B.L S.L W.L W.S
C1 5 3 1.12gr .61gr
C2 5 2 .87gr .49gr
C3 5 2 1.2gr .71gr
T1 6 3 1.22gr .75gr
T2 6 3 .98gr .53gr
T3 6 3 1.28gr 1.04gr
  • TotalW Control: 4.99gr
  • TotalW T.at: 5.74gr

We need a bigger sample.

Intergenic sequences in T.atroviride

Things to do

  • Compare Coordinates of augustus pred with .gtf.

Things done

  • Comparing.

Loogbook

  • As I can see and the results shows, prediction with JGI vs 454 is indifferent.

Extras