Difference between revisions of "User:Jose Fabricio Lopez/Notebook/GEDF/2012/09/25"

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(Intergenic sequences in T.atroviride)
(Intergenic sequences in T.atroviride)
 
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====Things to do====
 
====Things to do====
 
*Check and Analyze [[User:Jose Fabricio Lopez/Notebook/GEDF/2012/09/20#Intergenic sequences in T.atroviride| BLASTs]]
 
*Check and Analyze [[User:Jose Fabricio Lopez/Notebook/GEDF/2012/09/20#Intergenic sequences in T.atroviride| BLASTs]]
 +
*Make prediction of [[User:Jose Fabricio Lopez/Notebook/GEDF/2012/09/19#Loogbook 2| 0bp]]
 
====Things done====
 
====Things done====
 
*Blasts btwn GenomeJGI Vs Genome454.
 
*Blasts btwn GenomeJGI Vs Genome454.
 +
*Prediction Runing
 
===Loogbook===
 
===Loogbook===
 
*Sensitivity of 0.7574812 both!!!
 
*Sensitivity of 0.7574812 both!!!
*Apparently there is no difference betwn data training.
+
**Apparently there is no difference betwn data training.
 +
*The fasta file in predicction had some errors in format. Doing it again. Using just 25th sept predictions.
  
 
==Extras==
 
==Extras==
  
 
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Latest revision as of 12:58, 25 September 2012

Fungi.jpg Gene Expression and Development in Fungi <html><img src="http://openwetware.org/images/9/94/Report.png" border="0" /></html> Main project page
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Trichoderma & P. vulgaris interaction

Things to do

Things done

Loogbook

Intergenic sequences in T.atroviride

Things to do

Things done

  • Blasts btwn GenomeJGI Vs Genome454.
  • Prediction Runing

Loogbook

  • Sensitivity of 0.7574812 both!!!
    • Apparently there is no difference betwn data training.
  • The fasta file in predicction had some errors in format. Doing it again. Using just 25th sept predictions.

Extras