User:Ilya/Yeast/Phylogeny: Difference between revisions

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==Species==
==Species <cite>Cliften-Science-2003</cite>==
*[[Yeast:Phylogeny/Saccharomyces cerevisiae|Saccharomyces cerevisiae]]
 
*[[Yeast:Phylogeny/Saccharomyces paradoxus|Saccharomyces paradoxus]]
===Sensu stricto===
*[[Yeast:Phylogeny/Saccharomyces mikatae|Saccharomyces mikatae]]
*[[User:Ilya/Yeast/Phylogeny/Saccharomyces cerevisiae|Saccharomyces cerevisiae]]
*[[Yeast:Phylogeny/Saccharomyces kudriavzevii|Saccharomyces kudriavzevii]]
*[[User:Ilya/Yeast/Phylogeny/Saccharomyces paradoxus|Saccharomyces cariocanus]]
*[[Yeast:Phylogeny/Saccharomyces bayanus|Saccharomyces bayanus]]
*[[User:Ilya/Yeast/Phylogeny/Saccharomyces paradoxus|Saccharomyces paradoxus]]
*[[Yeast:Phylogeny/Saccharomyces castellii|Saccharomyces castellii]]
*[[User:Ilya/Yeast/Phylogeny/Saccharomyces mikatae|Saccharomyces mikatae]]
*[[Yeast:Phylogeny/Saccharomyces kluyveri|Saccharomyces kluyveri]]
*[[User:Ilya/Yeast/Phylogeny/Saccharomyces kudriavzevii|Saccharomyces kudriavzevii]]
*[[Yeast:Phylogeny/Aspergillus nidulans|Aspergillus nidulans]]
*[[User:Ilya/Yeast/Phylogeny/Saccharomyces bayanus|Saccharomyces bayanus]]
*[[Yeast:Phylogeny/Ashbya gossypii|Ashbya gossypii]]
*[[User:Ilya/Yeast/Phylogeny/Saccharomyces bayanus|Saccharomyces pastorianus]]
*[[Yeast:Phylogeny/Neurospora crassa|Neurospora crassa]]
 
*[[Yeast:Phylogeny/Schizosaccharomyces pombe|Schizosaccharomyces pombe]]
===Sensu lato===
*[[Yeast:Phylogeny/Ustilago maydis|Ustilago maydis]]
*[[User:Ilya/Yeast/Phylogeny/Saccharomyces castellii|Saccharomyces castellii]]
*[[Yeast:Phylogeny/Candida albicans|Candida albicans]]
 
*[[Yeast:Phylogeny/Coprinus cinereus|Coprinus cinereus]]
===Other===
*[[Yeast:Phylogeny/Candida glabrata|Candida glabrata]]
*[[User:Ilya/Yeast/Phylogeny/Saccharomyces kluyveri|Saccharomyces kluyveri]] (petite negative)
*[[Yeast:Phylogeny/Cryptococcus neoformans|Cryptococcus neoformans]]
 
*[[Yeast:Phylogeny/Fusarium graminearum|Fusarium graminearum]]
===Fungi===
*[[Yeast:Phylogeny/Magnaporthe grisea|Magnaporthe grisea]]
*[[User:Ilya/Yeast/Phylogeny/Schizosaccharomyces pombe|Schizosaccharomyces pombe]]
*[[User:Ilya/Yeast/Phylogeny/Aspergillus nidulans|Aspergillus nidulans]]
*[[User:Ilya/Yeast/Phylogeny/Ashbya gossypii|Ashbya gossypii]]
*[[User:Ilya/Yeast/Phylogeny/Neurospora crassa|Neurospora crassa]]
*[[User:Ilya/Yeast/Phylogeny/Ustilago maydis|Ustilago maydis]]
*[[User:Ilya/Yeast/Phylogeny/Candida albicans|Candida albicans]]
*[[User:Ilya/Yeast/Phylogeny/Coprinus cinereus|Coprinus cinereus]]
*[[User:Ilya/Yeast/Phylogeny/Candida glabrata|Candida glabrata]]
*[[User:Ilya/Yeast/Phylogeny/Cryptococcus neoformans|Cryptococcus neoformans]]
*[[User:Ilya/Yeast/Phylogeny/Fusarium graminearum|Fusarium graminearum]]
*[[User:Ilya/Yeast/Phylogeny/Magnaporthe grisea|Magnaporthe grisea]]


==Miscellaneous==
==Miscellaneous==
*[http://www.ncbi.nlm.nih.gov/sutils/genom_table.cgi?organism=fungi BLAST with fungi genomes]
*Areas of species comparison:
*Areas of species comparison:
**cell type control
**cell type control
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Abstract:<br/>
Abstract:<br/>
The highly conserved pheromone response MAP kinase and nutrient-sensing cAMP/PKA signal pathways are critical for filamentation, mating and virulence in many pathogenic fungi. A comparison of their functions in two human pathogens Candida albicans and Cryptococcus neoformans, and in two plant pathogens, Magnaporthe grisea and Ustilago maydis, shows that virulence is tightly associated with filamentation and mating in these fungi, suggesting an evolutionary link between pathogenesis and cellular development.
The highly conserved pheromone response MAP kinase and nutrient-sensing cAMP/PKA signal pathways are critical for filamentation, mating and virulence in many pathogenic fungi. A comparison of their functions in two human pathogens Candida albicans and Cryptococcus neoformans, and in two plant pathogens, Magnaporthe grisea and Ustilago maydis, shows that virulence is tightly associated with filamentation and mating in these fungi, suggesting an evolutionary link between pathogenesis and cellular development.
==References==
<biblio>
#Cliften-Science-2003 pmid=12775844
</biblio>

Latest revision as of 20:15, 30 August 2007

Species [1]

Sensu stricto

Sensu lato

Other

Fungi

Miscellaneous

  • BLAST with fungi genomes
  • Areas of species comparison:
    • cell type control
    • mitosis/meiosis
    • mating (connection to nutritional control)
    • pheromone production

Pathogenic Fungi: Structural Biology and Taxonomy
Chapter 6: Regulation of Morphogenesis by Conserved Developmental Pathways in Pathogenic Fungi
Abstract:
The highly conserved pheromone response MAP kinase and nutrient-sensing cAMP/PKA signal pathways are critical for filamentation, mating and virulence in many pathogenic fungi. A comparison of their functions in two human pathogens Candida albicans and Cryptococcus neoformans, and in two plant pathogens, Magnaporthe grisea and Ustilago maydis, shows that virulence is tightly associated with filamentation and mating in these fungi, suggesting an evolutionary link between pathogenesis and cellular development.

References

  1. Cliften P, Sudarsanam P, Desikan A, Fulton L, Fulton B, Majors J, Waterston R, Cohen BA, and Johnston M. Finding functional features in Saccharomyces genomes by phylogenetic footprinting. Science. 2003 Jul 4;301(5629):71-6. DOI:10.1126/science.1084337 | PubMed ID:12775844 | HubMed [Cliften-Science-2003]