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Revision as of 16:35, 4 June 2007 by Ilya (talk | contribs) (Lab computing)
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Ilya Sytchev (Илья Сычёв) is a graduate student in Bioinformatics at Northeastern University working in Endy Lab at MIT.

Contact: @




Mating pheromone response pathway analysis across yeast and related species



Software development

BioBricks aligner - aligns sequence reads (fragments) to Biobrick sequence

Lab computing


Synthetic Biology


  • Biotool2Web: Creating Simple Web Interfaces for Bioinformatics Applications
  • Sedna is an open source XML-native database management system developed from scratch in C/C++ and Scheme
  • Aggregate Data utilizes AJAX-based "sliders" so survey takers can choose anywhere along a spectrum of opinion
  • CHM file viewers for non-Windows platforms
  • Tor: an anonymous Internet communication system
  • Wireshark: network protocol analyzer (successor to Ethereal)
  • Babel - convert between various formats (Excel, JSON, N3, RDF/XML, etc)
  • Web 2.0-style buttons

Data visualization

  • Many Eyes - a site for sharing and commenting on visualizations by IBM
  • Data360
  • Swivel: YouTube for data - visualize and share your data with others

Application servers

  • Whitebeam - open source; applications are written as a set of XML pages that contain embedded JavaScript


<html> <a href="" id="clustrMapsLink"><img src="" style="border:1px solid;" alt="Locations of visitors to this page" title="Locations of visitors to this page" id="clustrMapsImg" onError="this.onError=null; this.src=''; document.getElementById('clustrMapsLink').href=''" /> </a> </html>