Talk:Streptomyces:Publications

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Toggle and Biblio

I thought this might be a useful example of my publication display using toggle and biblio extensions.

Taken from OpenWetWare:Toggle

Multiple

  • item1
  • item2
  • toggle item1
  • toggle item2
  • toggle both items
* {{toggle|item1||item1 item}}
* {{toggle|item2||item2 item}}
* <span class="_toggler-item1">toggle item1</span>
* <span class="_toggler-item2">toggle item2</span>
* <span class="_toggler-item">toggle both items</span>

Taken from Template:Toggle

{{{1}}}
<div class="_toggle {{{3|}}}">{{{1}}}</div>
<div class="_toggle {{{3|}}}" style="display:none;">{{{2}}}</div>

My understanding and usage of Toggle with the template

<span class="_toggler-item1">toggle item1</span>
<span class="_toggler-item2">toggle item2</span>
<span class="_toggler-item">toggle both items</span>
  • The text item1 after toggler- is a reference name to the text/link/biblio/item you want to toggle.
  • The text between the brackets >toggle item1< is the text that shows on the wiki page.
{{toggle|item1||item1 item}}
{{toggle|item2||item2 item}}
  • The text item1 after toggle| is whatever text/link/biblio/item you want to toggle.
  • The text item1 after || should be the same reference from the class line, <span class="_toggler-item1"&#62toggle item1</span>
  • The text item is another reference to enable all the objects containing the same reference to be toggled together.
  • The code {{toggle means that the display text and the text/link/biblio/item, are passed into the template for parsing.
  • The | enables the data to be sent to particular parts of the template.
<div class="_toggle {{{3|}}}">{{{1}}}</div>
<div class="_toggle {{{3|}}}" style="display:none;">{{{2}}}</div>
  • The numbers 1 and 2 in the brackets receive the text/link/biblio/item to be toggled.
  • The number 3 in brackets receives the reference names, i.e. |%#124;item1 item}}
  • By using the code {{toggle|item1||item1 item}} the text/link/biblio/item to be toggled is automatically on show.
  • If you want the default setting to for the text/link/biblio/item to be hidden by default, use the following:

{{toggle||item1|item1 item}}

  • Note the change in position of the vertical bar, which sends the data to different section of the template to be handled and therefore has a different output (hidden).

Example

<span class="_toggler-Kelemen">2000 - Present</span>
<span class="_toggler-KelemenPre2000">Pre 2000</span> 
<span class="_toggler-List">Toggle Lists</span>

{{toggle|<biblio> #[[Streptomyces:PublicationsKelemenList]]</biblio>||Kelemen List}}
{{toggle||<biblio> #[[Streptomyces:PublicationsKelemenListPre2000]]</biblio>|KelemenPre2000 List}}

2000 - Present Pre 2000 Toggle Lists

  1. Gaskell AA, Crack JC, Kelemen GH, Hutchings MI, and Le Brun NE. RsmA is an anti-sigma factor that modulates its activity through a [2Fe-2S] cluster cofactor. J Biol Chem. 2007 Oct 26;282(43):31812-20. DOI:10.1074/jbc.M705160200 | PubMed ID:17766240 | HubMed [Gaskell-JBiolChem-2007]
  2. Dalton KA, Thibessard A, Hunter JI, and Kelemen GH. A novel compartment, the 'subapical stem' of the aerial hyphae, is the location of a sigN-dependent, developmentally distinct transcription in Streptomyces coelicolor. Mol Microbiol. 2007 May;64(3):719-37. DOI:10.1111/j.1365-2958.2007.05684.x | PubMed ID:17462019 | HubMed [Dalton-MolMicro-2007]
  3. Hunt AC, Servín-González L, Kelemen GH, and Buttner MJ. The bldC developmental locus of Streptomyces coelicolor encodes a member of a family of small DNA-binding proteins related to the DNA-binding domains of the MerR family. J Bacteriol. 2005 Jan;187(2):716-28. DOI:10.1128/JB.187.2.716-728.2005 | PubMed ID:15629942 | HubMed [Hunt-JBac-2005]
  4. Traag BA, Kelemen GH, and Van Wezel GP. Transcription of the sporulation gene ssgA is activated by the IclR-type regulator SsgR in a whi-independent manner in Streptomyces coelicolor A3(2). Mol Microbiol. 2004 Aug;53(3):985-1000. DOI:10.1111/j.1365-2958.2004.04186.x | PubMed ID:15255907 | HubMed [Traag-MolMicro-2004]
  5. Viollier PH, Kelemen GH, Dale GE, Nguyen KT, Buttner MJ, and Thompson CJ. Specialized osmotic stress response systems involve multiple SigB-like sigma factors in Streptomyces coelicolor. Mol Microbiol. 2003 Feb;47(3):699-714. PubMed ID:12535070 | HubMed [Viollier-MolMicro-2003]
  6. Kelemen GH, Viollier PH, Tenor J, Marri L, Buttner MJ, and Thompson CJ. A connection between stress and development in the multicellular prokaryote Streptomyces coelicolor A3(2). Mol Microbiol. 2001 May;40(4):804-14. PubMed ID:11401688 | HubMed [Kelemen-MolMicro-2001]
All Medline abstracts: PubMed | HubMed


  • Alternativly, you don't have to refer to the template, you can import the code and use it directly. For example:
<span class="_toggler-Kelemen">Toggle 2000 - Present</span>
<span class="_toggler-KelemenPre2000">Toggle Pre 2000</span>
<span class="_toggler-List">Toggle Lists</span>
<br>
<div class="_toggle Kelemen List"><biblio> #[[Streptomyces:PublicationsKelemenList]]</biblio></div>
<div class="_toggle KelemenPre2000 List" style="display:none;"><biblio> #[[Streptomyces:PublicationsKelemenListPre2000]]</biblio></div>

Toggle 2000 - Present Toggle Pre 2000 Toggle Lists

  1. Gaskell AA, Crack JC, Kelemen GH, Hutchings MI, and Le Brun NE. RsmA is an anti-sigma factor that modulates its activity through a [2Fe-2S] cluster cofactor. J Biol Chem. 2007 Oct 26;282(43):31812-20. DOI:10.1074/jbc.M705160200 | PubMed ID:17766240 | HubMed [Gaskell-JBiolChem-2007]
  2. Dalton KA, Thibessard A, Hunter JI, and Kelemen GH. A novel compartment, the 'subapical stem' of the aerial hyphae, is the location of a sigN-dependent, developmentally distinct transcription in Streptomyces coelicolor. Mol Microbiol. 2007 May;64(3):719-37. DOI:10.1111/j.1365-2958.2007.05684.x | PubMed ID:17462019 | HubMed [Dalton-MolMicro-2007]
  3. Hunt AC, Servín-González L, Kelemen GH, and Buttner MJ. The bldC developmental locus of Streptomyces coelicolor encodes a member of a family of small DNA-binding proteins related to the DNA-binding domains of the MerR family. J Bacteriol. 2005 Jan;187(2):716-28. DOI:10.1128/JB.187.2.716-728.2005 | PubMed ID:15629942 | HubMed [Hunt-JBac-2005]
  4. Traag BA, Kelemen GH, and Van Wezel GP. Transcription of the sporulation gene ssgA is activated by the IclR-type regulator SsgR in a whi-independent manner in Streptomyces coelicolor A3(2). Mol Microbiol. 2004 Aug;53(3):985-1000. DOI:10.1111/j.1365-2958.2004.04186.x | PubMed ID:15255907 | HubMed [Traag-MolMicro-2004]
  5. Viollier PH, Kelemen GH, Dale GE, Nguyen KT, Buttner MJ, and Thompson CJ. Specialized osmotic stress response systems involve multiple SigB-like sigma factors in Streptomyces coelicolor. Mol Microbiol. 2003 Feb;47(3):699-714. PubMed ID:12535070 | HubMed [Viollier-MolMicro-2003]
  6. Kelemen GH, Viollier PH, Tenor J, Marri L, Buttner MJ, and Thompson CJ. A connection between stress and development in the multicellular prokaryote Streptomyces coelicolor A3(2). Mol Microbiol. 2001 May;40(4):804-14. PubMed ID:11401688 | HubMed [Kelemen-MolMicro-2001]
All Medline abstracts: PubMed | HubMed