Quint Lab:Publications: Difference between revisions

From OpenWetWare
Jump to navigationJump to search
No edit summary
No edit summary
(10 intermediate revisions by 2 users not shown)
Line 8: Line 8:


'''2013'''
'''2013'''
*Navarro-Quezada A, '''Schumann N''', '''Quint M''' ('''2013''') Plant F-Box protein evolution is determined by lineage-specific timing of major gene family expansion waves. [http://dx.plos.org/10.1371/journal.pone.0068672 PloS ONE] (accepted) ('''open access''').
*Poeschl Y, '''Delker C''', '''Trenner J''', '''Ullrich KK''', '''Quint M''', Grosse I ('''2013''') Optimized Probe Masking for Comparative Transcriptomics of Closely Related Species. [http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0078497 PLoS ONE 8:e78497] ('''open access''').




*Dekkers BJW, Pearce S, van Bolderen-Veldkamp RP, Marshall A, Widera P, Gilbert J, '''Drost H-G''', Bassel GW, Müller K, King JR, Wood ATA, Grosse I, '''Quint M''', Krasnogor N, Leubner-Metzger G, Holdsworth, MJ, Bentsink L ('''2013''') Transcriptional Dynamics of Two Seed Compartments with Opposing Roles in Arabidopsis Seed Germination. [http://www.plantphysiol.org/content/early/2013/07/15/pp.113.223511.abstract?sid=c1b1442a-dd24-4e95-8627-7551ae6aca0d Plant Physiology online early] ('''open access''').  
*Dekkers BJW, Pearce S, van Bolderen-Veldkamp RP, Marshall A, Widera P, Gilbert J, '''Drost H-G''', Bassel GW, Müller K, King JR, Wood ATA, Grosse I, '''Quint M''', Krasnogor N, Leubner-Metzger G, Holdsworth MJ, Bentsink L ('''2013''') Transcriptional Dynamics of Two Seed Compartments with Opposing Roles in Arabidopsis Seed Germination. [http://www.ncbi.nlm.nih.gov/pubmed/23858430 Plant Physiology 163: 205-215] ('''open access''').


*Navarro-Quezada A, '''Schumann N''', '''Quint M''' ('''2013''') Plant F-Box protein evolution is determined by lineage-specific timing of major gene family expansion waves. [http://dx.plos.org/10.1371/journal.pone.0068672 PloS ONE 8: e68672] ('''open access''').


*Huang H, '''Quint M''', Gray WM ('''2013''') The eta7/csn3-3 auxin response mutant of Arabidopsis defines a novel function for the CSN3 subunit of the COP9 signalosome. [http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0066578 PLoS ONE 8: e66578] ('''open access''').
 
*Huang H, '''Quint M''', Gray WM ('''2013''') The ''eta7/csn3-3'' auxin response mutant of Arabidopsis defines a novel function for the CSN3 subunit of the COP9 signalosome. [http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0066578 PLoS ONE 8: e66578] ('''open access''').




Line 21: Line 24:




*'''Quint M'''*, Drost H-G, Gabel A, '''Ullrich KK''', Boenn M, Grosse I ('''2012''') A transcriptomic hourglass in plant embryogenesis. [http://www.ncbi.nlm.nih.gov/pubmed/22951968 Nature 490:98-101] (*corresponding author)
*'''Quint M'''*, Drost H-G, Gabel A, '''Ullrich KK''', Boenn M, Grosse I ('''2012''') A transcriptomic hourglass in plant embryogenesis. [http://www.ncbi.nlm.nih.gov/pubmed/22951968 Nature 490:98-101] (*corresponding author).




Line 27: Line 30:




*Stenzel I, Otto M, '''Delker C''', Kirmse N, Schmidt D, Miersch O, Hause B, Wasternack C. ('''2012''') ALLENE OXIDE CYCLASE (AOC) gene family members of Arabidopsis thaliana: tissue- and organ-specific promoter activities and in vivo heteromerization [http://jxb.oxfordjournals.org/content/early/2012/09/21/jxb.ers261.full.pdf+html Journal of Experimental Botany doi: 10.1093/jxb/ers261]
*Stenzel I, Otto M, '''Delker C''', Kirmse N, Schmidt D, Miersch O, Hause B, Wasternack C. ('''2012''') ALLENE OXIDE CYCLASE (AOC) gene family members of Arabidopsis thaliana: tissue- and organ-specific promoter activities and in vivo heteromerization [http://www.ncbi.nlm.nih.gov/pubmed/23028017 Journal of Experimental Botany 63:6125-38] ('''open access''').




Line 43: Line 46:
*'''Delker C''', Pöschl Y, '''Raschke A''', '''Ullrich K''', '''Ettingshausen S''', '''Hauptmann V''', Grosse I, '''Quint M''' ('''2010''') Natural variation of transcriptional auxin response networks in Arabidopsis thaliana. [http://www.ncbi.nlm.nih.gov/pubmed/20622145 Plant Cell 22:2184-2200] ('''open access''').
*'''Delker C''', Pöschl Y, '''Raschke A''', '''Ullrich K''', '''Ettingshausen S''', '''Hauptmann V''', Grosse I, '''Quint M''' ('''2010''') Natural variation of transcriptional auxin response networks in Arabidopsis thaliana. [http://www.ncbi.nlm.nih.gov/pubmed/20622145 Plant Cell 22:2184-2200] ('''open access''').


 
*Ludwig-Müller J, '''Denk K''', Cohen JD, '''Quint M''' ('''2010''') An inhibitor of tryptophan-dependent biosynthesis of indole-3-acetic acid alters seedling development in Arabidopsis. [http://www.springerlink.com/content/h52m48m283g25777/?p=2fa0ab5fecfe47fdb442effb9736ddc2&pi=0 Journal Plant Growth Regul 29:242-248].
*Ludwig-Müller J, '''Denk K''', Cohen JD, '''Quint M''' ('''2010''') An inhibitor of tryptophan-dependent biosynthesis of indole-3-acetic acid alters seedling development in Arabidopsis. [http://www.springerlink.com/content/h52m48m283g25777/?p=2fa0ab5fecfe47fdb442effb9736ddc2&pi=0 Journal Plant Growth Regul 29:242-248].


Line 71: Line 74:




*Frisch M*, '''Quint M'''*, Lübberstedt T, Melchinger AE ('''2004''') Duplicate marker loci can result in incorrect locus orders on linkage maps. [http://www.ncbi.nlm.nih.gov/pubmed/14968304?ordinalpos=7&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum Theoretical and Applied Genetics 109: 305-316] (*co-first authors)<br>  
*Frisch M*, '''Quint M'''*, Lübberstedt T, Melchinger AE ('''2004''') Duplicate marker loci can result in incorrect locus orders on linkage maps. [http://www.ncbi.nlm.nih.gov/pubmed/14968304?ordinalpos=7&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum Theoretical and Applied Genetics 109: 305-316] (*co-first authors).<br>  




Line 80: Line 83:




*Dussle CM, '''Quint M''', Xu L, Melchinger E, Lübberstedt T ('''2002''') Conversion of AFLP fragments tightly linked to SCMV resistance genes Scmv1 and Scmv2 into simple PCR-based markers. [http://www.ncbi.nlm.nih.gov/pubmed/12582898 Theoretical and Applied Genetics 105:1190-1195]
*Dussle CM, '''Quint M''', Xu L, Melchinger E, Lübberstedt T ('''2002''') Conversion of AFLP fragments tightly linked to SCMV resistance genes Scmv1 and Scmv2 into simple PCR-based markers. [http://www.ncbi.nlm.nih.gov/pubmed/12582898 Theoretical and Applied Genetics 105:1190-1195].




*'''Quint M''', Mihaljevic R, Dussle M, Xu L, Melchinger E, Lübberstedt T ('''2002''') Development of RGA-CAPS markers and genetic mapping of candidate genes for sugarcane mosaic virus resistance in maize. [http://www.ncbi.nlm.nih.gov/pubmed/12582538 Theoretical and Applied Genetics 105:355-363]
*'''Quint M''', Mihaljevic R, Dussle M, Xu L, Melchinger E, Lübberstedt T ('''2002''') Development of RGA-CAPS markers and genetic mapping of candidate genes for sugarcane mosaic virus resistance in maize. [http://www.ncbi.nlm.nih.gov/pubmed/12582538 Theoretical and Applied Genetics 105:355-363].

Revision as of 06:34, 13 November 2013

home        research        people        papers        teaching        join us        internal        pictures        contact       


Papers

lab members in bold:

2013

  • Poeschl Y, Delker C, Trenner J, Ullrich KK, Quint M, Grosse I (2013) Optimized Probe Masking for Comparative Transcriptomics of Closely Related Species. PLoS ONE 8:e78497 (open access).


  • Dekkers BJW, Pearce S, van Bolderen-Veldkamp RP, Marshall A, Widera P, Gilbert J, Drost H-G, Bassel GW, Müller K, King JR, Wood ATA, Grosse I, Quint M, Krasnogor N, Leubner-Metzger G, Holdsworth MJ, Bentsink L (2013) Transcriptional Dynamics of Two Seed Compartments with Opposing Roles in Arabidopsis Seed Germination. Plant Physiology 163: 205-215 (open access).


  • Navarro-Quezada A, Schumann N, Quint M (2013) Plant F-Box protein evolution is determined by lineage-specific timing of major gene family expansion waves. PloS ONE 8: e68672 (open access).


  • Huang H, Quint M, Gray WM (2013) The eta7/csn3-3 auxin response mutant of Arabidopsis defines a novel function for the CSN3 subunit of the COP9 signalosome. PLoS ONE 8: e66578 (open access).


2012

  • Janitza P, Ullrich KK, Quint M (2012) Toward a comprehensive phylogenetic reconstruction of the evolutionary history of mitogen-activated protein kinases in the plant kingdom. Frontiers in Plant Science 3:271 (open access).


  • Quint M*, Drost H-G, Gabel A, Ullrich KK, Boenn M, Grosse I (2012) A transcriptomic hourglass in plant embryogenesis. Nature 490:98-101 (*corresponding author).


  • Brandt R, Salla-Martret M, Bou-Torrent J, Musielak T, Stahl M, Lanz C, Ott F, Schmid M, Greb T, Schwarz M, Choi S-B, Quint M, Palauqui J-C, Martinez-Garcia J, Wenkel S (2012) Genome-wide analysis of REVOLUTA target genes reveals a link between leaf patterning and light-regulated growth responses. Plant Journal 72:31-42.


  • Stenzel I, Otto M, Delker C, Kirmse N, Schmidt D, Miersch O, Hause B, Wasternack C. (2012) ALLENE OXIDE CYCLASE (AOC) gene family members of Arabidopsis thaliana: tissue- and organ-specific promoter activities and in vivo heteromerization Journal of Experimental Botany 63:6125-38 (open access).


  • Stenzel I, Ischebeck T, Quint M, Heilmann I (2012). Variable regions of PI4P 5-kinases direct PtdIns(4,5)P2 towards alternative regulatory functions in tobacco pollen tubes. Front. Plant Sci. 2:114 (open access).


2011


  • Schumann N, Navarro-Quezada AR, Ullrich K, Kuhl C, Quint M (2011) Molecular Evolution and Selection Patterns of Plant F-box Proteins with C-terminal Kelch Repeats. Plant Physiology 155:835-850 (open access).


2010

  • Delker C, Pöschl Y, Raschke A, Ullrich K, Ettingshausen S, Hauptmann V, Grosse I, Quint M (2010) Natural variation of transcriptional auxin response networks in Arabidopsis thaliana. Plant Cell 22:2184-2200 (open access).


  • Ludwig-Müller J, Denk K, Cohen JD, Quint M (2010) An inhibitor of tryptophan-dependent biosynthesis of indole-3-acetic acid alters seedling development in Arabidopsis. Journal Plant Growth Regul 29:242-248.


  • Yamaguchi I, Cohen JD, Culler AH, Quint M et al. (2010) Plant Hormones. In: Lew Mander and Hung-Wen (Ben) Liu, Editor(s)-in-Chief, Comprehensive Natural Products II, Elsevier, Oxford, 2010, pages 9-125.


2009

  • Quint M, Barkawi LS, Fan K-T, Cohen JD, Gray WM (2009) Arabidopsis IAR4 modulates auxin response by regulating auxin homeostasis. Plant Physiology 150:748-758 (open access).


2008

  • Zhang W, Ito H, Quint M, Huang H, Noël LD, Gray WM (2008) Genetic analysis of CAND1-CUL1 interactions in Arabidopsis supports a role for CAND1-mediated cycling of the SCFTIR1 complex. Proc Natl Acad Sci U S A 105:8470-8475 (open access).


  • Delker C, Raschke A, Quint M (2008) Auxin dynamics: the dazzling complexity of a small molecule’s message. Planta 227: 929-941.


  • Quint M, Lübberstedt T (2008) Application of resistance gene analogs in breeding for virus resistance. In: Techniques in Diagnosis of Plant Viruses. pp:265-286; Ed. by GP Rao, Valverde RA, Christomas D, Studium Press LLC, USA.


2002-2006


  • Quint M, Ito H, Zhang, W, Gray WM (2005) Characterization of a novel temperature-sensitive allele of the CUL1/AXR6 subunit of SCF ubiquitin-ligases. Plant Journal 43: 371-383 (open access).






  • Quint M, Mihaljevic R, Dussle M, Xu L, Melchinger E, Lübberstedt T (2002) Development of RGA-CAPS markers and genetic mapping of candidate genes for sugarcane mosaic virus resistance in maize. Theoretical and Applied Genetics 105:355-363.