OHSU Knight Cancer Institute Research Groups

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Revision as of 20:47, 21 January 2009 by Maureen E. Hoatlin (talk | contribs)
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Equipped with his five senses, man explores the universe around him and calls the adventure Science.  ~Edwin Powell Hubble, The Nature of Science, 1954

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OHSU Cancer Institute Main Page

OHSU Main Page


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About Us

  • We are a group of Cancer Research Labs in the OHSU Knight Cancer Institute in Portland, OR., working together on different approaches aimed at understanding the basic science of cancer. This site is a collaborative web site called a wiki, so members of this group can add content, post pictures from events, participate in discussions, etc. To do so, you need an OpenWetWare account--to get one, see this page to sign up. If you are unfamiliar with editing a wiki, check out this tutorial. For more global changes and suggestions, please use the tab at the top of the page called talk. An example of a collaborative wiki-based discussion is here.

OCI Research Groups

  • Please add your text and links and revise these pages at will
  • Follow the tutorials listed below and if you get stuck make an appointment with me and we can work quickly together. If you can write an email and google, you can make a wiki!
  • email Maureen through OpenWetWare or contact me by:
  • Phone: 503-494-1123
  • OWW users: Post a message on Maureen's talk page

Action Items

  1. Get this website up and running.
  2. Pursue the possibility of a new graduate "Program in Cancer Biology". - Matt 15:47, 24 July 2008 (UTC): Met with Dr. Hallick on July 23rd and obtained the forms necessary for approval of a new Graduate Program. This is a process that will take up to a year to complete. - Matt 21:37, 6 August 2008 (UTC):Started working on the Proposal, realtime version can be found here [1]
  3. Institute a "Basic Science Retreat" in the Fall that is coordinated with the OCI retreat and monthly research presentations.

Community Bulletin Board

Visitors

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Recent changes

19 April 2018

     11:57 

XROMM‎‎ (2 changes | history) . . (+436). . [Aolsen‎ (2×)]

     

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(cur | prev) . . (+108). . Aolsen (talk | contribs)

     

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(cur | prev) . . (+328). . Aolsen (talk | contribs)

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Silver: 2018 Meeting Schedule‎‎ (4 changes | history) . . (+6). . [PamSilver‎ (4×)]

     

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(cur | prev) . . (+2). . PamSilver (talk | contribs) (June)

     

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(cur | prev) . . (0). . PamSilver (talk | contribs)

     

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(cur | prev) . . (+1). . PamSilver (talk | contribs) (May)

     

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(cur | prev) . . (+3). . PamSilver (talk | contribs) (April)

     11:26 (Move log) . . Aolsen (talk | contribs) moved page Xromm to XROMM(Acronym looks better in caps)

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Xromm‎‎ (2 changes | history) . . (+708). . [Aolsen‎ (2×)]

     

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(cur | prev) . . (-767). . Aolsen (talk | contribs)

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(cur | prev) . . (+1,475). . Aolsen (talk | contribs) (Created page with "{{back to protocols}} X-ray Reconstruction of Moving Morphology (XROMM) is a 3D imaging technology, developed at Brown University, for visualizing rapid skeletal movement in v...")

     08:40  Taylor:Publications‎ (diff | hist) . . (+18). . Lynne S. Taylor (talk | contribs) (PUBLICATIONS)
     07:22  Lee:JC‎ (diff | hist) . . (+166). . Wooin Lee (talk | contribs) (Lab meeting schedule)

18 April 2018

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X-Lab‎‎ (4 changes | history) . . (0). . [ChanEngr‎ (4×)]

     

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User:Korey Griffin‎‎ (2 changes | history) . . (+32). . [Korey Griffin‎ (2×)]

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(cur | prev) . . (-47). . Korey Griffin (talk | contribs) (Contact)

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(cur | prev) . . (+79). . Korey Griffin (talk | contribs) (Empirical Resources)

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User:Johannes Stuttmann‎‎ (3 changes | history) . . (+4,407). . [Johannes Stuttmann‎ (3×)]

     

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(cur | prev) . . (+1,692). . Johannes Stuttmann (talk | contribs)

     

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(cur | prev) . . (+2,470). . Johannes Stuttmann (talk | contribs)

     

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(cur | prev) . . (+245). . Johannes Stuttmann (talk | contribs)

     13:02  Hydrochloric acid‎ (diff | hist) . . (+1). . Yar (talk | contribs) (typing error from user email)

     12:52 

(User creation log). .

[Yar‎ (2×)]

     

12:52

. . User account Ally B (talk | contribs) was created by Yar (talk | contribs) and password was sent by email ‎

     

12:52

. . User account Jakob (talk | contribs) was created by Yar (talk | contribs) and password was sent by email ‎

N    12:46 

BIOL478/S18:Microarray Data Analysis‎‎ (24 changes | history) . . (+34,776). . [Kam D. Dahlquist‎ (24×)]

     

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(cur | prev) . . (-70). . Kam D. Dahlquist (talk | contribs) (Gridding and Generating Intensity Data: remove old Brightspace link)

     

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(cur | prev) . . (+1). . Kam D. Dahlquist (talk | contribs) (GenePix Pro Protocol (Steps 1-3): fix Brightspace link to raw data)

     

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(cur | prev) . . (+1,241). . Kam D. Dahlquist (talk | contribs) (Before We Begin: add section on lab notebook)

     

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(cur | prev) . . (0). . Kam D. Dahlquist (talk | contribs) (Background: fix list formatting)

     

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(cur | prev) . . (+108). . Kam D. Dahlquist (talk | contribs) (Background: add GRNsight)

     

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(cur | prev) . . (+3,845). . Kam D. Dahlquist (talk | contribs) (Identifying regulatory transcription factors responsible for observed changes in gene expression (step 10): paste in GRNsight instructions)

     

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(cur | prev) . . (+3,072). . Kam D. Dahlquist (talk | contribs) (Identifying regulatory transcription factors responsible for observed changes in gene expression (step 10): paste in protocol from Biomath modeling, modify for HMO1)

     

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(cur | prev) . . (+114). . Kam D. Dahlquist (talk | contribs) (Clustering and GO Term Enrichment with stem (steps 7-8): add section for step 10)

     

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(cur | prev) . . (-751). . Kam D. Dahlquist (talk | contribs) (Clustering and GO Term Enrichment with stem (steps 7-8): delete comment, emphasize to unzip)

     

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(cur | prev) . . (0). . Kam D. Dahlquist (talk | contribs) (Modified t test for each timepoint: fix formula)

     

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(cur | prev) . . (+52). . Kam D. Dahlquist (talk | contribs) (Sanity Check: Number of genes significantly changed: add label to link)

     

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(cur | prev) . . (+29). . Kam D. Dahlquist (talk | contribs) (Sanity Check: Number of genes significantly changed: add link to xkcd comic)

     

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(cur | prev) . . (-360). . Kam D. Dahlquist (talk | contribs) (replace opi1 with hmo1)

     

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(cur | prev) . . (+18). . Kam D. Dahlquist (talk | contribs) (replace wt with dHMO1)

     

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(cur | prev) . . (+36). . Kam D. Dahlquist (talk | contribs) (Modified t test for each timepoint: replace wt with dHMO1)

     

11:20

(cur | prev) . . (-22). . Kam D. Dahlquist (talk | contribs) (Looking at the raw data: fix links to SGD)

     

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(cur | prev) . . (+3). . Kam D. Dahlquist (talk | contribs) (Downloading the Data: change to hmo1)

     

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(cur | prev) . . (+35). . Kam D. Dahlquist (talk | contribs) (Statistical Analysis (Step 6): change to delta-hmo1)

     

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(cur | prev) . . (+61). . Kam D. Dahlquist (talk | contribs) (GenePix Pro Protocol (Steps 1-3): note that this will be demo'd, change opi1 to hmo1)

     

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(cur | prev) . . (+27). . Kam D. Dahlquist (talk | contribs) (Background: steps 1-3 done for you)

     

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(cur | prev) . . (+74). . Kam D. Dahlquist (talk | contribs) (Background: add link for YEASTRACT)

     

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(cur | prev) . . (+15). . Kam D. Dahlquist (talk | contribs) (change dates, mention of Windows 10)

     

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(cur | prev) . . (+27,230). . Kam D. Dahlquist (talk | contribs) (paste in from S18)

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(cur | prev) . . (+18). . Kam D. Dahlquist (talk | contribs) (create page with under construction flag)

     10:27  Dahlquist:Protocols‎ (diff | hist) . . (+152). . Kam D. Dahlquist (talk | contribs) (Dry Lab Protocols: create link to BIOL 478 Spring 2018 protocol)

     09:43 

Crosby:Lab Members‎‎ (2 changes | history) . . (+41). . [Mohammad H. Dezfulian‎ (2×)]

     

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(cur | prev) . . (+71). . Mohammad H. Dezfulian (talk | contribs) (Recent Alumni)

     

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(cur | prev) . . (-30). . Mohammad H. Dezfulian (talk | contribs) (Graduate Students)

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