Difference between revisions of "Nescent ngs 2011:Notebook/nescent ngs 2011"

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(Project Description/Abstract)
(Notes)
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* Library prep and platform related
 
* Library prep and platform related
 
* Quality Control
 
* Quality Control
* Assembly
+
* Assembly (de novo)
 +
[http://bowtie-bio.sourceforge.net/index.shtml Bowtie]
 +
[http://www.novocraft.com/main/index.php Novoalign]
 +
[http://soap.genomics.org.cn/soapdenovo.html SOAPdenovo]
 
* Alignment
 
* Alignment
 
* RAD
 
* RAD

Revision as of 20:50, 28 August 2011

<!-- sibboleth --><div id="lncal1" style="border:0px;"><div style="display:none;" id="id">lncal1</div><div style="display:none;" id="dtext"></div><div style="display:none;" id="page">Nescent ngs 2011:Notebook/nescent ngs 2011</div><div style="display:none;" id="fmt">yyyy/MM/dd</div><div style="display:none;" id="css">OWWNB</div><div style="display:none;" id="month"></div><div style="display:none;" id="year"></div><div style="display:none;" id="readonly">Y</div></div>

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Welcome!

  • Share notes and comments from the course!
  • Nescent hosted course materials are here: [1]

Notes

Please add notes by topic:

  • Library prep and platform related
  • Quality Control
  • Assembly (de novo)

Bowtie Novoalign SOAPdenovo

  • Alignment
  • RAD
  • Gene discovery and annotation
  • Variant calling
  • RNA-seq
  • Phylogenomics
  • Further analyses


Recent changes

19 October 2017

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How to write a research paper‎‎ (2 changes | history) . . (+91). . [Formand‎ (2×)]

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(cur | prev) . . (-1). . Formand (talk | contribs) (External links)

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18 October 2017

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BME100 f2017:Group8 W1030 L4‎‎ (2 changes | history) . . (+426). . [Jennifer L. Brodsky‎; Jacob Tomas Harrison Haye‎]

     

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(cur | prev) . . (+17). . Jacob Tomas Harrison Haye (talk | contribs) (SNP Information & Primer Design)

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(Upload log). .

[Miguel R. Almanza Lopez‎; Emily A. Hanzlick‎; Kaifu Chen‎ (2×); Jacob Tomas Harrison Haye‎ (4×); Alivia Ankrum‎ (8×)]

     

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BME100 f2017:Group1 W1030 L4‎‎ (17 changes | history) . . (+1,361). . [Abby E. Krell‎ (7×); Emily A. Hanzlick‎ (10×)]

     

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BME100 f2017:Group12 W1030 L4‎‎ (8 changes | history) . . (+713). . [Alivia Ankrum‎ (8×)]

     

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