Mesoplasma florum:Codon usage
From OpenWetWare
The codon usage table for Mesoplasma florum is here:
Mesoplasma florum L1 [gbbct]: 683 CDS's (245761 codons) AmAcid Codon Number /1000 Fraction ..
Amino acid | Codon | Number | Number / 1000 | Probability | EC Probability | Compromise Probability |
Gly | GGG | 848 | 3.45 | 0.06 | ||
Gly | GGA | 5717 | 23.26 | 0.43 | ||
Gly | GGT | 6147 | 25.01 | 0.47 | ||
Gly | GGC | 461 | 1.88 | 0.03 | ||
Glu | GAG | 1543 | 6.28 | 0.09 | ||
Glu | GAA | 16303 | 66.34 | 0.91 | ||
Asp | GAT | 10918 | 44.43 | 0.83 | ||
Asp | GAC | 2203 | 8.96 | 0.17 | ||
Val | GTG | 632 | 2.57 | 0.04 | ||
Val | GTA | 4237 | 17.24 | 0.28 | ||
Val | GTT | 9660 | 39.31 | 0.65 | ||
Val | GTC | 344 | 1.40 | 0.02 | ||
Ala | GCG | 519 | 2.11 | 0.04 | ||
Ala | GCA | 6198 | 25.22 | 0.46 | ||
Ala | GCT | 6297 | 25.62 | 0.47 | ||
Ala | GCC | 522 | 2.12 | 0.04 | ||
Arg | AGG | 194 | 0.79 | 0.03 | ||
Arg | AGA | 5448 | 22.17 | 0.80 | ||
Ser | AGT | 3752 | 15.27 | 0.23 | ||
Ser | AGC | 935 | 3.80 | 0.06 | ||
Lys | AAG | 2110 | 8.59 | 0.09 | ||
Lys | AAA | 21721 | 88.38 | 0.91 | ||
Asn | AAT | 13612 | 55.39 | 0.77 | ||
Asn | AAC | 4161 | 16.93 | 0.23 | ||
Met | ATG | 5660 | 23.03 | 1.00 | ||
Ile | ATA | 7748 | 31.53 | 0.32 | ||
Ile | ATT | 14701 | 59.82 | 0.60 | ||
Ile | ATC | 1968 | 8.01 | 0.08 | ||
Thr | ACG | 211 | 0.86 | 0.02 | ||
Thr | ACA | 7243 | 29.47 | 0.55 | ||
Thr | ACT | 5558 | 22.62 | 0.42 | ||
Thr | ACC | 274 | 1.11 | 0.02 | ||
Trp | TGG | 101 | 0.41 | 0.04 | ||
Trp | TGA | 2489 | 10.13 | 0.96 | ||
Cys | TGT | 1275 | 5.19 | 0.85 | ||
Cys | TGC | 228 | 0.93 | 0.15 | ||
End | TAG | 132 | 0.54 | 0.19 | ||
End | TAA | 551 | 2.24 | 0.81 | ||
Tyr | TAT | 7191 | 29.26 | 0.78 | ||
Tyr | TAC | 1972 | 8.02 | 0.22 | ||
Leu | TTG | 1765 | 7.18 | 0.08 | ||
Leu | TTA | 15736 | 64.03 | 0.71 | ||
Phe | TTT | 10293 | 41.88 | 0.81 | ||
Phe | TTC | 2391 | 9.73 | 0.19 | ||
Ser | TCG | 206 | 0.84 | 0.01 | ||
Ser | TCA | 7413 | 30.16 | 0.46 | ||
Ser | TCT | 3585 | 14.59 | 0.22 | ||
Ser | TCC | 92 | 0.37 | 0.01 | ||
Arg | CGG | 6 | 0.02 | 0.00 | ||
Arg | CGA | 128 | 0.52 | 0.02 | ||
Arg | CGT | 998 | 4.06 | 0.15 | ||
Arg | CGC | 67 | 0.27 | 0.01 | ||
Gln | CAG | 404 | 1.64 | 0.05 | ||
Gln | CAA | 7058 | 28.72 | 0.95 | ||
His | CAT | 2211 | 9.00 | 0.73 | ||
His | CAC | 836 | 3.40 | 0.27 | ||
Leu | CTG | 182 | 0.74 | 0.01 | ||
Leu | CTA | 1690 | 6.88 | 0.08 | ||
Leu | CTT | 2682 | 10.91 | 0.12 | ||
Leu | CTC | 52 | 0.21 | 0.00 | ||
Pro | CCG | 203 | 0.83 | 0.03 | ||
Pro | CCA | 3516 | 14.31 | 0.57 | ||
Pro | CCT | 2306 | 9.38 | 0.37 | ||
Pro | CCC | 157 | 0.64 | 0.03 |