Difference between revisions of "Mazel:Publications"

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<biblio>#Bikard-2010 pmid=20534632</biblio><br>
<biblio>#Bikard-2010 pmid=20534632</biblio><br>
<biblio>#Jové-2010 pmid=20066027</biblio><br>
<biblio>#Jove-2010 pmid=20066027</biblio><br>
<biblio>#Chayot-2010 pmid=20133858</biblio><br>
<biblio>#Chayot-2010 pmid=20133858</biblio><br>
<biblio>#Duperthuy-2010 pmid=20074236</biblio><br>
<biblio>#Duperthuy-2010 pmid=20074236</biblio><br>

Revision as of 08:00, 14 July 2010

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Bacterial Genome Plasticity

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  1. Bikard D, Julié-Galau S, Cambray G, and Mazel D. The synthetic integron: an in vivo genetic shuffling device. Nucleic Acids Res. 2010 Aug;38(15):e153. DOI:10.1093/nar/gkq511 | PubMed ID:20534632 | HubMed [Bikard-2010]

  1. Jové T, Da Re S, Denis F, Mazel D, and Ploy MC. Inverse correlation between promoter strength and excision activity in class 1 integrons. PLoS Genet. 2010 Jan;6(1):e1000793. DOI:10.1371/journal.pgen.1000793 | PubMed ID:20066027 | HubMed [Jove-2010]

  1. Chayot R, Montagne B, Mazel D, and Ricchetti M. An end-joining repair mechanism in Escherichia coli. Proc Natl Acad Sci U S A. 2010 Feb 2;107(5):2141-6. DOI:10.1073/pnas.0906355107 | PubMed ID:20133858 | HubMed [Chayot-2010]

  1. Duperthuy M, Binesse J, Le Roux F, Romestand B, Caro A, Got P, Givaudan A, Mazel D, Bachère E, and Destoumieux-Garzón D. The major outer membrane protein OmpU of Vibrio splendidus contributes to host antimicrobial peptide resistance and is required for virulence in the oyster Crassostrea gigas. Environ Microbiol. 2010 Apr;12(4):951-63. DOI:10.1111/j.1462-2920.2009.02138.x | PubMed ID:20074236 | HubMed [Duperthuy-2010]

  1. Frumerie C, Ducos-Galand M, Gopaul DN, and Mazel D. The relaxed requirements of the integron cleavage site allow predictable changes in integron target specificity. Nucleic Acids Res. 2010 Jan;38(2):559-69. DOI:10.1093/nar/gkp990 | PubMed ID:19914932 | HubMed [Frumerie-2010]

  1. Bouvier M, Ducos-Galand M, Loot C, Bikard D, and Mazel D. Structural features of single-stranded integron cassette attC sites and their role in strand selection. PLoS Genet. 2009 Sep;5(9):e1000632. DOI:10.1371/journal.pgen.1000632 | PubMed ID:19730680 | HubMed [Bouvier-2009]

  1. Le Roux F, Zouine M, Chakroun N, Binesse J, Saulnier D, Bouchier C, Zidane N, Ma L, Rusniok C, Lajus A, Buchrieser C, Médigue C, Polz MF, and Mazel D. Genome sequence of Vibrio splendidus: an abundant planctonic marine species with a large genotypic diversity. Environ Microbiol. 2009 Aug;11(8):1959-70. DOI:10.1111/j.1462-2920.2009.01918.x | PubMed ID:19364337 | HubMed [LeRoux-2009]

  1. Jacquier H, Zaoui C, Sanson-le Pors MJ, Mazel D, and Berçot B. Translation regulation of integrons gene cassette expression by the attC sites. Mol Microbiol. 2009 Jun;72(6):1475-86. DOI:10.1111/j.1365-2958.2009.06736.x | PubMed ID:19486293 | HubMed [Jacquier-2009]

  1. Guerin E, Cambray G, Sanchez-Alberola N, Campoy S, Erill I, Da Re S, Gonzalez-Zorn B, Barbé J, Ploy MC, and Mazel D. The SOS response controls integron recombination. Science. 2009 May 22;324(5930):1034. DOI:10.1126/science.1172914 | PubMed ID:19460999 | HubMed [Guerin-2009]
             abstract full text (free)

  1. Cambray G and Mazel D. Synonymous genes explore different evolutionary landscapes. PLoS Genet. 2008 Nov;4(11):e1000256. DOI:10.1371/journal.pgen.1000256 | PubMed ID:19008944 | HubMed [Cambray-2008]

  1. Binesse J, Delsert C, Saulnier D, Champomier-Vergès MC, Zagorec M, Munier-Lehmann H, Mazel D, and Le Roux F. Metalloprotease vsm is the major determinant of toxicity for extracellular products of Vibrio splendidus. Appl Environ Microbiol. 2008 Dec;74(23):7108-17. DOI:10.1128/AEM.01261-08 | PubMed ID:18836018 | HubMed [Binesse-2008]

  1. Babic A, Guérout AM, and Mazel D. Construction of an improved RP4 (RK2)-based conjugative system. Res Microbiol. 2008 Sep-Oct;159(7-8):545-9. DOI:10.1016/j.resmic.2008.06.004 | PubMed ID:18638548 | HubMed [Babic-2008]

  1. Reynaud Y, Saulnier D, Mazel D, Goarant C, and Le Roux F. Correlation between detection of a plasmid and high-level virulence of Vibrio nigripulchritudo, a pathogen of the shrimp Litopenaeus stylirostris. Appl Environ Microbiol. 2008 May;74(10):3038-47. DOI:10.1128/AEM.02680-07 | PubMed ID:18359828 | HubMed [Reynaud-2008]

  1. Wilde C, Mazel D, Hochhut B, Middendorf B, Le Roux F, Carniel E, Dobrindt U, and Hacker J. Delineation of the recombination sites necessary for integration of pathogenicity islands II and III into the Escherichia coli 536 chromosome. Mol Microbiol. 2008 Apr;68(1):139-51. DOI:10.1111/j.1365-2958.2008.06145.x | PubMed ID:18312267 | HubMed [Wilde-2008]

  1. Demarre G, Frumerie C, Gopaul DN, and Mazel D. Identification of key structural determinants of the IntI1 integron integrase that influence attC x attI1 recombination efficiency. Nucleic Acids Res. 2007;35(19):6475-89. DOI:10.1093/nar/gkm709 | PubMed ID:17884913 | HubMed [Demarre-2007]

  1. Wilbaux M, Mine N, Guérout AM, Mazel D, and Van Melderen L. Functional interactions between coexisting toxin-antitoxin systems of the ccd family in Escherichia coli O157:H7. J Bacteriol. 2007 Apr;189(7):2712-9. DOI:10.1128/JB.01679-06 | PubMed ID:17259320 | HubMed [Wilbaux-2007]

  1. Le Roux F, Binesse J, Saulnier D, and Mazel D. Construction of a Vibrio splendidus mutant lacking the metalloprotease gene vsm by use of a novel counterselectable suicide vector. Appl Environ Microbiol. 2007 Feb;73(3):777-84. DOI:10.1128/AEM.02147-06 | PubMed ID:17122399 | HubMed [Le_Roux-2007]

  1. Szekeres S, Dauti M, Wilde C, Mazel D, and Rowe-Magnus DA. Chromosomal toxin-antitoxin loci can diminish large-scale genome reductions in the absence of selection. Mol Microbiol. 2007 Mar;63(6):1588-605. DOI:10.1111/j.1365-2958.2007.05613.x | PubMed ID:17367382 | HubMed [Szekers-2007]

  1. Mazel D. Integrons: agents of bacterial evolution. Nat Rev Microbiol. 2006 Aug;4(8):608-20. DOI:10.1038/nrmicro1462 | PubMed ID:16845431 | HubMed [Mazel-2006]

  1. MacDonald D, Demarre G, Bouvier M, Mazel D, and Gopaul DN. Structural basis for broad DNA-specificity in integron recombination. Nature. 2006 Apr 27;440(7088):1157-62. DOI:10.1038/nature04643 | PubMed ID:16641988 | HubMed [McDonald-2006]

  1. Bouvier M, Demarre G, and Mazel D. Integron cassette insertion: a recombination process involving a folded single strand substrate. EMBO J. 2005 Dec 21;24(24):4356-67. DOI:10.1038/sj.emboj.7600898 | PubMed ID:16341091 | HubMed [Bouvier-2005]

  1. Val ME, Bouvier M, Campos J, Sherratt D, Cornet F, Mazel D, and Barre FX. The single-stranded genome of phage CTX is the form used for integration into the genome of Vibrio cholerae. Mol Cell. 2005 Aug 19;19(4):559-66. DOI:10.1016/j.molcel.2005.07.002 | PubMed ID:16109379 | HubMed [Val-2005]

  1. Skurnik D, Le Menac'h A, Zurakowski D, Mazel D, Courvalin P, Denamur E, Andremont A, and Ruimy R. Integron-associated antibiotic resistance and phylogenetic grouping of Escherichia coli isolates from healthy subjects free of recent antibiotic exposure. Antimicrob Agents Chemother. 2005 Jul;49(7):3062-5. DOI:10.1128/AAC.49.7.3062-3065.2005 | PubMed ID:15980401 | HubMed [SKURNIK-2005]

  1. Biskri L, Bouvier M, Guérout AM, Boisnard S, and Mazel D. Comparative study of class 1 integron and Vibrio cholerae superintegron integrase activities. J Bacteriol. 2005 Mar;187(5):1740-50. DOI:10.1128/JB.187.5.1740-1750.2005 | PubMed ID:15716446 | HubMed [BISKRI-2005]

  1. Demarre G, Guérout AM, Matsumoto-Mashimo C, Rowe-Magnus DA, Marlière P, and Mazel D. A new family of mobilizable suicide plasmids based on broad host range R388 plasmid (IncW) and RP4 plasmid (IncPalpha) conjugative machineries and their cognate Escherichia coli host strains. Res Microbiol. 2005 Mar;156(2):245-55. DOI:10.1016/j.resmic.2004.09.007 | PubMed ID:15748991 | HubMed [DEMARRE-2005]

  1. Matsumoto-Mashimo C, Guerout AM, and Mazel D. A new family of conditional replicating plasmids and their cognate Escherichia coli host strains. Res Microbiol. 2004 Jul-Aug;155(6):455-61. DOI:10.1016/j.resmic.2004.03.001 | PubMed ID:15249062 | HubMed [MATSUMOTO-MASHIMO-2004]

  1. Biskri L and Mazel D. Erythromycin esterase gene ere(A) is located in a functional gene cassette in an unusual class 2 integron. Antimicrob Agents Chemother. 2003 Oct;47(10):3326-31. PubMed ID:14506050 | HubMed [BISKRI-2003]

  1. Rowe-Magnus DA, Guerout AM, Biskri L, Bouige P, and Mazel D. Comparative analysis of superintegrons: engineering extensive genetic diversity in the Vibrionaceae. Genome Res. 2003 Mar;13(3):428-42. DOI:10.1101/gr.617103 | PubMed ID:12618374 | HubMed [ROWE-MAGNUS-2003]

  1. Rowe-Magnus DA, Guerout AM, and Mazel D. Bacterial resistance evolution by recruitment of super-integron gene cassettes. Mol Microbiol. 2002 Mar;43(6):1657-69. PubMed ID:11952913 | HubMed [ROWE-MAGNUS-2002]

  1. Rowe-Magnus AD, Davies J, and Mazel D. Impact of integrons and transposons on the evolution of resistance and virulence. Curr Top Microbiol Immunol. 2002;264(2):167-88. PubMed ID:12012867 | HubMed [ROWE-MAGNUS2-2002]

  1. Rowe-Magnus DA and Mazel D. Integrons: natural tools for bacterial genome evolution. Curr Opin Microbiol. 2001 Oct;4(5):565-9. PubMed ID:11587934 | HubMed [ROWE-MAGNUS-2001]

  1. Hochhut B, Lotfi Y, Mazel D, Faruque SM, Woodgate R, and Waldor MK. Molecular analysis of antibiotic resistance gene clusters in vibrio cholerae O139 and O1 SXT constins. Antimicrob Agents Chemother. 2001 Nov;45(11):2991-3000. DOI:10.1128/AAC.45.11.2991-3000.2001 | PubMed ID:11600347 | HubMed [HOCHHUT-2001]

  1. Rowe-Magnus DA, Guerout AM, Ploncard P, Dychinco B, Davies J, and Mazel D. The evolutionary history of chromosomal super-integrons provides an ancestry for multiresistant integrons. Proc Natl Acad Sci U S A. 2001 Jan 16;98(2):652-7. DOI:10.1073/pnas.98.2.652 | PubMed ID:11209061 | HubMed [ROWE-MAGNUS2-2001]

  1. Mazel D, Dychinco B, Webb VA, and Davies J. Antibiotic resistance in the ECOR collection: integrons and identification of a novel aad gene. Antimicrob Agents Chemother. 2000 Jun;44(6):1568-74. PubMed ID:10817710 | HubMed [Mazel-2000]

  1. Rowe-Magnus DA, Guérout AM, and Mazel D. Super-integrons. Res Microbiol. 1999 Nov-Dec;150(9-10):641-51. PubMed ID:10673003 | HubMed [ROWE-MAGNUS-1999]

  1. Rowe-Magnus DA and Mazel D. Resistance gene capture. Curr Opin Microbiol. 1999 Oct;2(5):483-8. PubMed ID:10508722 | HubMed [ROWE-MAGNUS2-1999]

  1. Mazel D and Davies J. Antibiotic resistance in microbes. Cell Mol Life Sci. 1999 Nov 30;56(9-10):742-54. PubMed ID:11212334 | HubMed [Mazel-1999]

  1. Mazel D and Davies J. Antibiotic resistance. The big picture. Adv Exp Med Biol. 1998;456:1-6. PubMed ID:10549360 | HubMed [Mazel-1998]

  1. Mazel D, Dychinco B, Webb VA, and Davies J. A distinctive class of integron in the Vibrio cholerae genome. Science. 1998 Apr 24;280(5363):605-8. PubMed ID:9554855 | HubMed [Mazel2-1998]

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