Difference between revisions of "Lidstrom:Protocols"

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(General Lab:)
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*[[Lidstrom:Preparing Freezer Cell Stocks| Preparing Freezer Cell Stocks]]
 
*[[Lidstrom:Preparing Freezer Cell Stocks| Preparing Freezer Cell Stocks]]
 
*[[Lidstrom:Pouring Media Plates|Pouring Media Plates]]
 
*[[Lidstrom:Pouring Media Plates|Pouring Media Plates]]
*[[Lidstrom:Ordering | Ordering]]
 
  
 
==Cell Culture:==
 
==Cell Culture:==
 
*[[Lidstrom:Tube Spec|Tube Spec]]
 
*[[Lidstrom:Tube Spec|Tube Spec]]
 +
*[[Lidstrom: Bioscreen|Bioscreen Setup]]
 +
=== Methylotrophs ===
 +
*[[Lidstrom:MM1/MM2/MM3/HY|MM1/MM2/MM3/HY]]
 +
===E. coli === 
 
*[[Lidstrom:M9|M9 recipe]]
 
*[[Lidstrom:M9|M9 recipe]]
 
*[[Lidstrom:TB|Terrific Broth recipe]]
 
*[[Lidstrom:TB|Terrific Broth recipe]]
*[[Lidstrom: Bioscreen|Bioscreen Setup]]
+
*[[Lidstrom: EZ amino acid stock recipe|EZ amino acid stock recipe]]
  
 
==DNA/RNA:==
 
==DNA/RNA:==
  
 
===DNA===
 
===DNA===
 +
== PCR ==
 +
*[[Lidstrom:Colony PCR| Colony PCR]]
 +
*[[Lidstrom:PCR| PCR (in progress)]]
 +
*[[Lidstrom:Thermocyclers|Thermocyclers]]
 +
 +
====Isolation ====
 +
*[[Lidstrom:QIAquick Gel Extraction Kit Protocol|QIAquick Gel Extraction Kit Protocol]]
 +
*[[Lidstrom:Genomic DNA extraction|Genomic DNA minikit extraction]]
 +
*[[Lidstrom:Genomic DNA extraction|Genomic DNA phenol/chloroform extraction]]
  
 
====Manipulation====
 
====Manipulation====
 
*[[Lidstrom:Building with DNA|Intro: Building with DNA (in progress)]]
 
*[[Lidstrom:Building with DNA|Intro: Building with DNA (in progress)]]
*[[Lidstrom:Digestion with Restriction Enzymes|Digestion with Restriction Enzymes]]
 
*[[Lidstrom:Gibson Assembly| Gibson Assembly (In progress)]]
 
*[[Lidstrom:Ligation |Ligation (in progress)]]
 
 
*[[Lidstrom:Overlap Extension PCR| Overlap Extension PCR (in progress)]]
 
*[[Lidstrom:Overlap Extension PCR| Overlap Extension PCR (in progress)]]
 
*[[Qiagen_Buffers| Qiagen Buffer Recipes]]
 
*[[Qiagen_Buffers| Qiagen Buffer Recipes]]
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*[[Dorman:P1_phage_%28lysogenic%29|Phage Lysate Prep]]
 
*[[Dorman:P1_phage_%28lysogenic%29|Phage Lysate Prep]]
 
*[[Lidstrom:P1 Phage Transduction|P1 Phage Transduction (in progress)]]
 
*[[Lidstrom:P1 Phage Transduction|P1 Phage Transduction (in progress)]]
 +
 +
==== Restriction Cloning ====
 +
*[[Lidstrom:Digestion with Restriction Enzymes|Digestion with Restriction Enzymes]]
 +
*[[Lidstrom:Ligation |Ligation (in progress)]]
 +
 +
==== Gibson Cloning ====
 +
*[[Lidstrom:Gibson Assembly| Gibson Assembly (In progress)]]
  
 
====Obervation====
 
====Obervation====
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====Misc.====
 
====Misc.====
*[[Lidstrom:PCR| PCR (in progress)]]
 
 
*[[Lidstrom:Loading Dye Recipe|Loading Dye Recipe]]
 
*[[Lidstrom:Loading Dye Recipe|Loading Dye Recipe]]
 
*[[Lidstrom:Purifying DNA|Purifying DNA (in progress)]]
 
*[[Lidstrom:Purifying DNA|Purifying DNA (in progress)]]
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==Protein==
 
==Protein==
 
*[[Lidstrom: SDS-PAGE | SDS-PAGE Protein Gels]]
 
*[[Lidstrom: SDS-PAGE | SDS-PAGE Protein Gels]]
 +
*[[Lidstrom:BCA assay|BCA assay]] to determine protein concentration
 +
 +
==Buffers==
 +
*[[Lidstrom:Buffers|Buffers]]
  
 
==E. Coli==
 
==E. Coli==
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*[[Lidstrom:Competent Cells|Competent Cell Lines]]
 
*[[Lidstrom:Competent Cells|Competent Cell Lines]]
  
==Enzyme Assays==
+
== Lysing & Cells & Clarifying Extract ==
 +
*[[Lidstrom:French Press|French Press]]
 +
*[[Lidstrom:Sonicator|Sonication]]
 +
*[[Lidstrom:Ultracentrifuge|Ultracentrifuge]]
 +
 
 +
==Assays==
  
 
===General===
 
===General===
 
*[[Lidstrom: Plate Reader| Plate Reader Setup]]
 
*[[Lidstrom: Plate Reader| Plate Reader Setup]]
 +
*[[Lidstrom: Flow Cytometer| Flow Cytometer]]
  
 
===in vitro pathway assays (CO<sub>2</sub> project)===
 
===in vitro pathway assays (CO<sub>2</sub> project)===

Revision as of 11:57, 28 June 2013

Back home: Lidstrom

General Lab:

Cell Culture:

Methylotrophs

E. coli

DNA/RNA:

DNA

PCR

Isolation

Manipulation

Fancy Manipulation

Restriction Cloning

Gibson Cloning

Obervation

Misc.

Protein

Buffers

E. Coli

Lysing & Cells & Clarifying Extract

Assays

General

in vitro pathway assays (CO2 project)

Metabolomics

CO2 project