Difference between revisions of "Li Lab:People"

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A lab is a nurturing environment that aims to maximize the potential of students as scientists and as human beings.  -- '''Uri Alon'''
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A lab is a nurturing environment that aims to maximize the potential of students as scientists and as human beings.  -- '''Uri Alon''' <br/>
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[https://www.icloud.com/photostream/#A4JtdOXmGZvmDp '''Lab Pictures'''] 
  
 
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<h3>PI:[http://www.bcm.edu/mcb/?PMID=7802 Wei Li], PhD</h3>
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<h3>PI:[http://www.bcm.edu/mcb/?PMID=7802 Wei Li] (李蔚), PhD</h3>
 
   
 
   
  
[[Image: Li_wei.jpg‎|center]]  
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[[Image: Li_wei.jpg‎|center|150px|]]  
'''Associate Professor''' (tenured): 09/2011 - present<br/>
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'''Professor''' (tenured): 08/2016 - present<br/>
 +
'''Associate Professor''' (tenured): 10/2011 - 07/2016<br/>
 
'''Assistant Professor''' (tenure track): 11/2007 - 09/2011<br/>
 
'''Assistant Professor''' (tenure track): 11/2007 - 09/2011<br/>
 
Division of Biostatistics, Dan L. Duncan Cancer Center<br/>
 
Division of Biostatistics, Dan L. Duncan Cancer Center<br/>
 
[http://www.bcm.edu/mcb/?PMID=7802 Department of Molecular and Cellular Biology ]<br/>
 
[http://www.bcm.edu/mcb/?PMID=7802 Department of Molecular and Cellular Biology ]<br/>
 
Baylor College of Medicine.<br/>
 
Baylor College of Medicine.<br/>
[http://scholar.google.com/citations?hl=en&user=7IUCbE4AAAAJ&view_op=list_works&pagesize=100 My Citations @ Google Scholar]
 
  
 
'''Postdoctoral Fellow''':    06/2004 - 10/2007<br/>
 
'''Postdoctoral Fellow''':    06/2004 - 10/2007<br/>
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<h3>Instructor </h3>  
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<h3>Instructors </h3>  
 +
 
  
* Yuanxin Xi, PhD
 
Ph.D. in Bioinformatics, University of California, Davis
 
[[Image: YxiBCM.tif|center|100px|]]
 
  
 
<h3>Postdoctoral Fellows </h3>  
 
<h3>Postdoctoral Fellows </h3>  
  
  
* [http://kaifu.openwetware.org/ Kaifu Chen, PhD]
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* Jianzhong Su, PhD
Ph.D. in Genomics & Bioinformatics, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, China
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PhD in Computational Epigenetics and Biological Mathematics, Harbin Institute of Technology, China.
[[Image: kaifu.jpg|center|100px|]]  
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[[Image: Jianzhong.png |center|150px|]]
 +
 
 +
 
 +
* Jie Lyu, PhD (started 01.2016)
 +
Ph.D. in Computational Epigenetics and Developmental Biology, Harbin Institute of Technology, China.
 +
[[Image: Jielv.jpg |center|150px|]]
 +
 
 +
 
 +
* Lei Li, PhD
 +
PhD in Computational Biology, The Chinese University of Hong Kong
 +
[[Image: Lei.jpg |center|150px|]]
 +
 
  
 +
* Jiejun Shi, PhD
 +
PhD in Biology, Tongji University, China
 +
[[Image: Jiejun.jpg |center|150px|]]
  
  
 +
* Xiaodong Cui, PhD
 +
PhD in Electrical and Computer Engineering, University of Texas at San Antonio
 +
[[Image: Xiaodong.jpg |center|150px|]]
  
* [http://sun.openwetware.org Deqiang Sun, PhD]
 
Ph.D. in Condensed Matter Physics, Texas A&M University, College Station, Texas
 
[[Image: Test2.png|center|100px|]]
 
  
 +
* Xin Feng, PhD
 +
Ph.D. in Biomedical Engineering, Stony Brook University
 +
[[Image: xinfeng.jpg |center|150px|]]
  
  
* Xia Zheng, PhD
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<h3>Graduate Students</h3>
Ph.D. in Control Theory and Engineering, Zhejiang University, China
 
[[Image: Zheng.JPG|center|100px|]]
 
  
 +
*Jianfeng Xu
 +
2nd year graduate student, Molecular & Cellular Biology
 +
[[Image:jianx.jpg|center|150px|]]
  
  
* Hyun Jung Park, PhD
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*Fanglue Peng
Ph.D. in Computer Science, Rice University
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Graduate student, Molecular & Cellular Biology  <br/>
[[Image: HJInDenver.jpg|center|100px|]]  
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Co-mentored with Dr. Xi Chen
 +
[[Image:fanglue1.jpg|center|150px|]]
  
  
 +
<h3>System Admin (High Performance Computing)</h3>
  
* Benjamin Rodriguez, PhD
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* Michael D. Dehart
PhD in Integrated Biomedical Science, the Ohio State Univ
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B.S. in Computer Science, University of Houston Clear Lake
 +
[[Image: Michael.JPG‎|center|150px|]]
  
  
<h3>Graduate Students</h3>
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<h3> Lab Alumni </h3>  
 +
 
 +
* [http://www.mayo.edu/research/faculty/wang-liguo-ph-d/bio-00055202 Liguo Wang, PhD]
 +
Postdoc Fellow: 06/2008 - 06/2012<br/>Current Position: tenure-track Assistant Professor at Mayo Clinic
 +
[[Image: Liguow.jpg|center|150px|]]
 +
 
 +
 
 +
* [http://www.ibt.tamhsc.edu/faculty/sun-bio.html  Deqiang Sun, PhD]
 +
Postdoc Fellow: 2010 - 2014 <br/>
 +
Current Position: tenure-track Assistant Professor at Texas A&M IBT
 +
[[Image: Test2.png|center|150px|]]
 +
 
 +
 
 +
* [http://chenlab.openwetware.org Kaifu Chen, PhD]
 +
Postdoc Fellow: 2009-2013; instructor: 2013-2015 <br/>
 +
Current Position: tenure-track Assistant Professor at Cornel University & Methodist Hospital
 +
[[Image: kaifu.jpg|center|150px|]]
 +
 
 +
 
 +
* Yuanxin Xi, PhD
 +
Postdoc/Instructor: 2008-2016  <br/>
 +
Current Position: tenure-track Assistant Professor at UT Health (declined); now at MD Anderson
 +
[[Image: YxiBCM.tif|center|150px|]]
 +
 
 +
 
 +
* Zheng Xia, PhD 夏铮 (CPRIT Keck Fellow)
 +
Postdoc/Instructor: 2011-2016 <br/>
 +
Current Position: tenure-track Assistant Professor at Oregon Health & Science University (OHSU)
 +
[[Image: Zheng.JPG|center|150px|]]
  
* Kadir Caner Akdemir (co-mentored with Dr. Michelle Barton)
 
Ph.D. student, UT MD Anderson Cancer Center, Houston, TX <br/>
 
B.S. in Computer Engineering, Yeditepe University, Istanbul, Turkey
 
[[Image: Kadir.jpg|center|100px|]]
 
  
 +
* Hyun Jung Park, PhD (朴贤正)
 +
Ph.D. in Computer Science, Rice University<br/>
 +
Postdoc: 2012-2017 <br/>
 +
Current Position: tenure-track Assistant Professor at University of Pittsburgh Medical Center (UPMC)
 +
[[Image: HJInDenver.jpg|center|150px|]]
  
* Zeynep H Coban (co-mentored with Dr. Michelle Barton)
 
Ph.D. student, UT MD Anderson Cancer Center, Houston, TX <br/>
 
A.M in Biostatistics, Harvard University, Boston, MA <br/>
 
B.S. in Biological Sciences and Bioengineering, Sabanci University, Istanbul, Turkey
 
[[Image: Zeynep.jpg|center|100px|]]
 
  
 +
* Xueqiu Lin (Tongji University)
 +
[[Image: Xueqiulin.jpg|center|150px|]]
  
* Junsheng Chen (visiting student)
 
  
  
* Eric B. Rutledge (rotation student)
 
Md/PhD student, BCM
 
  
 +
<h4> Lab Alumni (co-mentored by Wei) </h4>
  
<h3>System Admin (High Performance Computing)</h3>
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* Benjamin Rodriguez, PhD
* Michael D. Dehart
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Postdoc Fellow (co-mentored with Peggy Goodell)
B.S. in Computer Science, University of Houston Clear Lake
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Current Position: Fellow at NIH
[[Image: Michael.JPG‎|center|100px|]]
 
  
 +
* Kadir Caner Akdemir
 +
PhD student (co-mentored with Michelle Barton): 2011 - 2013 <br/>
 +
Current Position: Postdoc Fellow at UT MD Anderson Cancer Center
  
<h3> Lab Alumni </h3>
+
* Zeynep H Coban (co-mentored with Michelle Barton)
* Hao Zhao, PhD
+
PhD student, UT MD Anderson Cancer Center, 2011-2014 <br/>
Ph.D. in Computer Science, City University of Hong Kong<br/>Postdoc Fellow: 07/2010 - 10/2011<br/>Current Position: Senior Statistical Analyst at MD Anderson Cancer Center
+
Current Position: Postdoc Fellow at Baylor
  
* Liguo Wang, PhD
+
* Teresa T. Yiu, PhD  
Ph.D. in Genomics & Bioinformatics, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, China<br/>Postdoc Fellow: 06/2008 - 06/2012<br/>Current Position: Assistant Professor at Mayo Clinic
+
instructor: 2014-2015 (NCI R25T fellow; co-mentored with Melissa Bondy)<br/>Current Position: Teacher in a private school
[[Image: Liguow.jpg|center|100px|]]
 

Latest revision as of 16:54, 4 January 2018

Baylor Blackboard.jpg Home        People        Publications        Collaborations        Software        Positions        Contact       


A lab is a nurturing environment that aims to maximize the potential of students as scientists and as human beings. -- Uri Alon
Lab Pictures

PI:Wei Li (李蔚), PhD


Li wei.jpg

Professor (tenured): 08/2016 - present
Associate Professor (tenured): 10/2011 - 07/2016
Assistant Professor (tenure track): 11/2007 - 09/2011
Division of Biostatistics, Dan L. Duncan Cancer Center
Department of Molecular and Cellular Biology
Baylor College of Medicine.

Postdoctoral Fellow: 06/2004 - 10/2007
Department of Biostatistics and Computational Biology
Dana Farber Cancer Institute
Harvard School of Public Health, Boston

Bioinformatics Group Leader: 01/2000 - 05/2004
Beijing Genomics Institute (BGI)
Chinese Academy of Sciences, Beijing, China

Ph.D. in Bioinformatics: 09/1998 - 09/2003
Institute of Biophysics
Chinese Academy of Sciences, Beijing, China


Instructors


Postdoctoral Fellows


  • Jianzhong Su, PhD

PhD in Computational Epigenetics and Biological Mathematics, Harbin Institute of Technology, China.

Jianzhong.png


  • Jie Lyu, PhD (started 01.2016)

Ph.D. in Computational Epigenetics and Developmental Biology, Harbin Institute of Technology, China.

Jielv.jpg


  • Lei Li, PhD

PhD in Computational Biology, The Chinese University of Hong Kong

Lei.jpg


  • Jiejun Shi, PhD

PhD in Biology, Tongji University, China

Jiejun.jpg


  • Xiaodong Cui, PhD

PhD in Electrical and Computer Engineering, University of Texas at San Antonio

Xiaodong.jpg


  • Xin Feng, PhD

Ph.D. in Biomedical Engineering, Stony Brook University

Xinfeng.jpg


Graduate Students

  • Jianfeng Xu

2nd year graduate student, Molecular & Cellular Biology

Jianx.jpg


  • Fanglue Peng

Graduate student, Molecular & Cellular Biology
Co-mentored with Dr. Xi Chen

Fanglue1.jpg


System Admin (High Performance Computing)

  • Michael D. Dehart

B.S. in Computer Science, University of Houston Clear Lake

Michael.JPG


Lab Alumni

Postdoc Fellow: 06/2008 - 06/2012
Current Position: tenure-track Assistant Professor at Mayo Clinic

Liguow.jpg


Postdoc Fellow: 2010 - 2014
Current Position: tenure-track Assistant Professor at Texas A&M IBT

Test2.png


Postdoc Fellow: 2009-2013; instructor: 2013-2015
Current Position: tenure-track Assistant Professor at Cornel University & Methodist Hospital

Kaifu.jpg


  • Yuanxin Xi, PhD

Postdoc/Instructor: 2008-2016
Current Position: tenure-track Assistant Professor at UT Health (declined); now at MD Anderson File:YxiBCM.tif


  • Zheng Xia, PhD 夏铮 (CPRIT Keck Fellow)

Postdoc/Instructor: 2011-2016
Current Position: tenure-track Assistant Professor at Oregon Health & Science University (OHSU)

Zheng.JPG


  • Hyun Jung Park, PhD (朴贤正)

Ph.D. in Computer Science, Rice University
Postdoc: 2012-2017
Current Position: tenure-track Assistant Professor at University of Pittsburgh Medical Center (UPMC)

HJInDenver.jpg


  • Xueqiu Lin (Tongji University)
Xueqiulin.jpg



Lab Alumni (co-mentored by Wei)

  • Benjamin Rodriguez, PhD

Postdoc Fellow (co-mentored with Peggy Goodell) Current Position: Fellow at NIH

  • Kadir Caner Akdemir

PhD student (co-mentored with Michelle Barton): 2011 - 2013
Current Position: Postdoc Fellow at UT MD Anderson Cancer Center

  • Zeynep H Coban (co-mentored with Michelle Barton)

PhD student, UT MD Anderson Cancer Center, 2011-2014
Current Position: Postdoc Fellow at Baylor

  • Teresa T. Yiu, PhD
instructor: 2014-2015 (NCI R25T fellow; co-mentored with Melissa Bondy)
Current Position: Teacher in a private school