Difference between revisions of "Koop:cGRASP"

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[[Image:Salmon_grasp.gif|left]]
cGRASP has three major scientific goals:<br>
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'''cGRASP has three major scientific goals:'''<br>
#to tie together the linkage map with the physical map<br>
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#tie together the linkage map with the physical map in Atlantic salmon<br>
#to locate genes of known function on the physical map and to understand how a duplicated genome reorganizes itself and controls sex-determination<br>
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#locate genes of known function on the physical map and to understand how a duplicated genome reorganizes itself and controls sex-determination<br>
#to examine gene expression at the transcriptional level and the translational level in several tissues and to identify molecules induced by physiological responses to stress, acclimatization, pathogens, and exposure to natural and introduced chemicals<br>
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#examine gene expression at the transcriptional and translational levels in several tissues and to identify molecules induced by physiological responses to stress, acclimatization, pathogens, and exposure to natural and introduced chemicals<br>
see [http://web.uvic.ca/cbr/grasp/execsummary.html Executive Summary] for more information <br>  
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see [http://web.uvic.ca/cbr/grasp/execsummary.html Executive Summary] for more information <br><br><br>  
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*'''Koop lab resources'''
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**[http://web.uvic.ca/cbr/grasp Official Koop cGRASP web page] <br>
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**[[Koop:cGRASP_pubs | cGRASP publications]]
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**[http://web.uvic.ca/grasp  Salmon Microarray]: databases, protocols and general info<br>
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**[http://woodstock.ceh.uvic.ca/estproj/index.cgi EST Database]  <br>
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**[http://lucy.ceh.uvic.ca/contigs/cbr_contig_viewer.py EST Clustering]  <br>
  
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*Koop lab resources
 
**[http://web.uvic.ca/cbr/grasp Official cGRASP web page] <br>
 
**[[Koop:cGRASP_pubs | cGRASP publications]]
 
**[[Koop:cGRASP_protocols | cGRASP protocols]]
 
**[http://web.uvic.ca/cbr/grasp/array.html Salmon Microarray]: databases, protocols and general info<br>
 
**[http://woodstock.ceh.uvic.ca/estproj/index.cgi EST Database] (Login = grasp Password = grasp] <br>
 
**[http://lucy.ceh.uvic.ca/contigs/cbr_contig_viewer.py EST Clustering] Login=grasp; Password=grasp <br>
 
**[http://guesswho.biol.uvic.ca:8050/ EST BLAST Server]<br>
 
  
*Other cGRASP resources and websites
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*'''Other cGRASP resources and websites'''
 
**[http://grasp.mbb.sfu.ca SFU GRASP site]: Physical maps, genetic maps, BAC ends  <br>
 
**[http://grasp.mbb.sfu.ca SFU GRASP site]: Physical maps, genetic maps, BAC ends  <br>
 
**[http://www.umb.no/?avd=40 CIGENE] (Centre for Integrative Genetics in Norway)<br>
 
**[http://www.umb.no/?avd=40 CIGENE] (Centre for Integrative Genetics in Norway)<br>
**[http://www.bcgsc.bc.ca/gc/salmon.shtml Genome Sciences Centre]<br>
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**[http://www.bcgsc.ca/project/salmon/grant_project_view B.C. Genome Sciences Centre]<br>
 
**[http://www.salmongenome.no/cgi-bin/sgp.cgi Salmon Genome project (Nor)]<br><br>  
 
**[http://www.salmongenome.no/cgi-bin/sgp.cgi Salmon Genome project (Nor)]<br><br>  
  
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*'''Media releases'''
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**[http://www.genomecanada.ca/xpublic/media/articlesDetails.asp?id=2048&l=e Toronto Star article on GRASP]
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{{Koop}}
 
{{Koop}}

Latest revision as of 11:48, 21 September 2010

cGRASP: consortium for Genomic Research on All Salmon


Salmon grasp.gif

cGRASP has three major scientific goals:

  1. tie together the linkage map with the physical map in Atlantic salmon
  2. locate genes of known function on the physical map and to understand how a duplicated genome reorganizes itself and controls sex-determination
  3. examine gene expression at the transcriptional and translational levels in several tissues and to identify molecules induced by physiological responses to stress, acclimatization, pathogens, and exposure to natural and introduced chemicals

see Executive Summary for more information







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