James P. McDonald Week 12

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Revision as of 15:03, 11 April 2013 by James P. McDonald (talk | contribs) (answered the first 4 questions)


  1. Why did you select this profile? In other words, why was it interesting to you?
    • I chose profile 48. I did this because all the genes are consistently upregulated for the first 3 time points (t15, t30, t60) and then drop down around zero by t120. The genes appear to be responding similarly to the cold shock, suggesting consistent responses.
  2. How many genes belong to this profile?
    • 48 genes belong to this profile
  3. How many genes were expected to belong to this profile?
    • 28.4 genes were expected to belong to this profile
  4. What is the p value for the enrichment of genes in this profile?
    • p-value = 4.2E-4 (significant)

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