Difference between revisions of "Hlavacek"

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(Selected Publications)
 
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Welcome to the Hlavacek wiki!
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==Research Interests==
  
<font color=red>This site is meant to serve as a guide for how to host a lab on OpenWetWare.  It is currently under development.</font>
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'''Modeling of cellular regulatory systems'''
  
'''Please see [[Help:Starting a lab wiki]] for detailed instructions on how to host a lab on OpenWetWare.'''
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*Biomolecular site dynamics
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*Cell signaling in immmunity and cancer
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*Autophagy
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*Computational methods and software tools
  
This page is the homepage of a sample lab titled "Hlavacek". 
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'''Bioinformatics'''
  
Feel free to copy the code from these generic lab wiki pages onto your own lab's pages.  Just be sure and replace every instance of <code>Hlavacek</code> with your own lab's name (like <code>Endy</code> or <code>Silver</code>).
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*TF binding site prediction
  
===Set up your contact information page===
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==Selected Publications==
Every new wiki page that you create for your lab should be named <code><Your PI's last name>:Name of the page</code>.
 
  
So much in the same way you created your lab wiki main page, you can start a new page titled <code><Your PI's last name>:Contact</code> to list the contact information for your lab. See [[Knight:Contact]], [[Smolke:Contact]] and [[Endy:Contact]] for examples.
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*Martin KR, Barua D, Kauffman AL, Westrate LM, Posner RG, Hlavacek WS, MacKeigan JP (2013) Computational model for autophagic vesicle dynamics in single cells. [http://www.landesbioscience.com/journals/autophagy/ Autophagy] '''9''', 74-92. PMID 23196898
  
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*Maienschein-Cline M, Dinner AR, Hlavacek WS, Mu F (2012) Improved predictions of transcription factor binding sites using physicochemical features of DNA. [http://nar.oxfordjournals.org/ Nucleic Acids Res] [http://nar.oxfordjournals.org/content/early/2012/08/24/nar.gks771.full?keytype=ref&ijkey=uzonNxxOdtYY6JN doi: 10.1093/nar/gks771] PMID 22923524
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Latest revision as of 18:34, 6 December 2012

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Research Interests

Modeling of cellular regulatory systems

  • Biomolecular site dynamics
  • Cell signaling in immmunity and cancer
  • Autophagy
  • Computational methods and software tools

Bioinformatics

  • TF binding site prediction

Selected Publications

  • Martin KR, Barua D, Kauffman AL, Westrate LM, Posner RG, Hlavacek WS, MacKeigan JP (2013) Computational model for autophagic vesicle dynamics in single cells. Autophagy 9, 74-92. PMID 23196898
  • Maienschein-Cline M, Dinner AR, Hlavacek WS, Mu F (2012) Improved predictions of transcription factor binding sites using physicochemical features of DNA. Nucleic Acids Res doi: 10.1093/nar/gks771 PMID 22923524