Difference between revisions of "Hlavacek"

From OpenWetWare
Jump to: navigation, search
(Selected Publications)
(Selected Publications)
 
Line 17: Line 17:
  
 
==Selected Publications==
 
==Selected Publications==
 
*Maienschein-Cline M, Dinner AR, Hlavacek WS, Mu F (2012) Improved predictions of transcription factor binding sites using physicochemical features of DNA. [http://nar.oxfordjournals.org/ Nucleic Acids Res] [http://nar.oxfordjournals.org/content/early/2012/08/24/nar.gks771.full?keytype=ref&ijkey=uzonNxxOdtYY6JN doi: 10.1093/nar/gks771] PMID 22923524
 
  
 
*Martin KR, Barua D, Kauffman AL, Westrate LM, Posner RG, Hlavacek WS, MacKeigan JP (2013) Computational model for autophagic vesicle dynamics in single cells. [http://www.landesbioscience.com/journals/autophagy/ Autophagy] '''9''', 74-92. PMID 23196898
 
*Martin KR, Barua D, Kauffman AL, Westrate LM, Posner RG, Hlavacek WS, MacKeigan JP (2013) Computational model for autophagic vesicle dynamics in single cells. [http://www.landesbioscience.com/journals/autophagy/ Autophagy] '''9''', 74-92. PMID 23196898
  
*Hlavacek WS, Faeder JR, Blinov ML, Posner RG, Hucka M, Fontana W (2006) Rules for modeling signal-transduction systems. [http://stke.sciencemag.org/ Science's STKE] '''2006''', re6. PMID 16849649
+
*Maienschein-Cline M, Dinner AR, Hlavacek WS, Mu F (2012) Improved predictions of transcription factor binding sites using physicochemical features of DNA. [http://nar.oxfordjournals.org/ Nucleic Acids Res] [http://nar.oxfordjournals.org/content/early/2012/08/24/nar.gks771.full?keytype=ref&ijkey=uzonNxxOdtYY6JN doi: 10.1093/nar/gks771] PMID 22923524
  
 
<!--
 
<!--

Latest revision as of 19:34, 6 December 2012

Flagman.png

Home        Contact        Calendar/Notebook        Group        Publications        Protocols        Presentations       


Research Interests

Modeling of cellular regulatory systems

  • Biomolecular site dynamics
  • Cell signaling in immmunity and cancer
  • Autophagy
  • Computational methods and software tools

Bioinformatics

  • TF binding site prediction

Selected Publications

  • Martin KR, Barua D, Kauffman AL, Westrate LM, Posner RG, Hlavacek WS, MacKeigan JP (2013) Computational model for autophagic vesicle dynamics in single cells. Autophagy 9, 74-92. PMID 23196898
  • Maienschein-Cline M, Dinner AR, Hlavacek WS, Mu F (2012) Improved predictions of transcription factor binding sites using physicochemical features of DNA. Nucleic Acids Res doi: 10.1093/nar/gks771 PMID 22923524