Harvard:Biophysics 101/2007

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Biophysics 101: Genomics, Computing, and Economics

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  • April 19: Post your plan for April 24 & 26.
  • April 12: Post your plan for April 17 & 19.
  • April 10: Sumary of class priorities - sign up for new problems.


Course overview

Focuses on modern technologies with exponential growth and their impact on global quality of life through weekly updated Wiki class project (in-depth case studies on personal genomics and/or biofuels). Integrating knowledge, tools for research, and commercial decision-making concerning new aspects of bioengineering, personalized medicine, genetically modified organisms, and stem cells. Interplays of biophysical, ecological, economic, and social/ethical modeling will be explored through multi-disciplinary teams of students, and individual brief reports.

Potential course projects

Earth 2.0

  • Analytic: Bioweather map. Collection and use of real-time assays to track virus outbreaks, etc.
  • Synthetic: Bioenergy. Integrated metabolic, genetic, economic, process, environmental modeling.

H. sapiens 2.0

Logistics

  • Meeting time: Tuesdays and Thursdays, 10:00—11:30 am
  • First class Thu 1-Feb-2007.
  • Location: Barker Center, Room 316
  • No exams
  • No prerequisites
  • Grading
    • 25% Participation
    • 25% Personal wiki page (weekly assignments)
    • 50% Contribution to group project

Background Info and previous class projects

Recent changes

26 September 2017

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BME100 f2017:Group7 W1030 L3‎‎ (13 changes | history) . . (+310). . [Sarah R. Brady‎ (13×)]

     

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(cur | prev) . . (+243). . Sarah R. Brady (talk | contribs) (Experimental Design of Own Device)

     

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(cur | prev) . . (+226). . Sarah R. Brady (talk | contribs) (Experimental Design of Own Device)

     

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(cur | prev) . . (+21). . Sarah R. Brady (talk | contribs) (Design Flaws and Recommendations)

     

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(cur | prev) . . (+36). . Sarah R. Brady (talk | contribs) (Experimental Design of Own Device)

     

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(cur | prev) . . (+20). . Sarah R. Brady (talk | contribs) (Descriptive Stats)

     

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(cur | prev) . . (+82). . Sarah R. Brady (talk | contribs) (Experimental Design of Own Device)

     

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(cur | prev) . . (-270). . Sarah R. Brady (talk | contribs) (Design Flaws and Recommendations)

     

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(cur | prev) . . (-17). . Sarah R. Brady (talk | contribs) (Heart Rate Average)

     

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(cur | prev) . . (-1). . Sarah R. Brady (talk | contribs) (Temperature Average)

     

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(cur | prev) . . (-25). . Sarah R. Brady (talk | contribs) (Inferential Stats)

     

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(cur | prev) . . (+2). . Sarah R. Brady (talk | contribs) (Inferential Stats)

     

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(cur | prev) . . (+4). . Sarah R. Brady (talk | contribs) (Heart Rate Data Discussion)

     

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(cur | prev) . . (-11). . Sarah R. Brady (talk | contribs) (Inferential Stats)

 m   14:12  Talk:Butlin:Unix for Bioinformatics - advanced tutorial‎ (diff | hist) . . (-183). . Claudius E Kerth (talk | contribs)

     14:11 

(Upload log). .

[Sayyed Ourmazd Mohseni‎; Irene Zhang‎; Pauline Wonnenberg‎ (3×); Sarah R. Brady‎ (4×)]

     

14:11

. . Sarah R. Brady (talk | contribs) uploaded File:Heart rate with asterisk.jpg

     

14:03

. . Pauline Wonnenberg (talk | contribs) uploaded a new version of File:Titration 2 Graph.png

     

14:03

. . Pauline Wonnenberg (talk | contribs) uploaded File:Titration 2 Graph.png

     

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. . Sarah R. Brady (talk | contribs) uploaded File:Temp with asterisk.jpg

     

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. . Pauline Wonnenberg (talk | contribs) uploaded File:Titration 1 Graph.png

     

13:54

. . Sarah R. Brady (talk | contribs) uploaded File:Temp bme 100.jpg(temp bme 100 group 7)

     

13:54

. . Sarah R. Brady (talk | contribs) uploaded a new version of File:Temp.jpg(temp bme 100 group 7)

     

13:23

. . Sayyed Ourmazd Mohseni (talk | contribs) uploaded File:Heart Rate 22.png

     

13:23

. . Irene Zhang (talk | contribs) uploaded File:Graph2Temperature.png

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Butlin:Unix for Bioinformatics - advanced tutorial‎‎ (3 changes | history) . . (+648). . [Claudius E Kerth‎ (3×)]

 m   

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(cur | prev) . . (-158). . Claudius E Kerth (talk | contribs) (/* TASK 12: I need to run programme X that requires 2 input files and cannot read compressed files. My input files are very large and disk space is always precious. How can I avoid first having to uncompress my input files and later recompress them whe...)

     

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(cur | prev) . . (+804). . Claudius E Kerth (talk | contribs) (Added blurb to endnote, with link to Arnie's speech)

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(cur | prev) . . (+2). . Claudius E Kerth (talk | contribs) (Notes)

     14:00  User:Pauline Wonnenberg/Notebook/CHEM 471 Fall 2017/2017/09/06‎ (diff | hist) . . (+5). . Pauline Wonnenberg (talk | contribs)

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Li Lab‎‎ (7 changes | history) . . (+3,624). . [Wei Li Bcm‎ (7×)]

     

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(cur | prev) . . (+1). . Wei Li Bcm (talk | contribs)

     

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(cur | prev) . . (-39). . Wei Li Bcm (talk | contribs)

     

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(cur | prev) . . (-342). . Wei Li Bcm (talk | contribs)

     

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(cur | prev) . . (-104). . Wei Li Bcm (talk | contribs)

     

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(cur | prev) . . (+4). . Wei Li Bcm (talk | contribs)

     

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(cur | prev) . . (+3,825). . Wei Li Bcm (talk | contribs)

     

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(cur | prev) . . (+279). . Wei Li Bcm (talk | contribs)

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Butlin:Unix for Bioinformatics - basic tutorial‎‎ (2 changes | history) . . (+961). . [Claudius E Kerth‎ (2×)]

     

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(cur | prev) . . (0). . Claudius E Kerth (talk | contribs) (put definition of Unix to the front)

     

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(cur | prev) . . (+961). . Claudius E Kerth (talk | contribs) (Added appeal not to copy-paste command lines)

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Taylor:Publications‎‎ (4 changes | history) . . (+631). . [Lynne S. Taylor‎ (4×)]

     

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(cur | prev) . . (+316). . Lynne S. Taylor (talk | contribs) (PUBLICATIONS)

     

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(cur | prev) . . (-3). . Lynne S. Taylor (talk | contribs) (PUBLICATIONS)

     

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(cur | prev) . . (+58). . Lynne S. Taylor (talk | contribs) (PUBLICATIONS)

     

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(cur | prev) . . (+260). . Lynne S. Taylor (talk | contribs) (PUBLICATIONS)

     13:35  BME100 f2017:Group15 W1030 L3‎ (diff | hist) . . (+3). . Kylie I. Mercer (talk | contribs) (OUR TEAM)

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BME100 f2017:Group9 W0800 L3‎‎ (4 changes | history) . . (+2,267). . [Irene Zhang‎ (4×)]

     

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(cur | prev) . . (+1,582). . Irene Zhang (talk | contribs) (Design Flaws and Recommendations)

     

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(cur | prev) . . (+610). . Irene Zhang (talk | contribs) (Inferential Stats)

     

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(cur | prev) . . (+39). . Irene Zhang (talk | contribs) (Descriptive Stats and Graph)

     

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(cur | prev) . . (+36). . Irene Zhang (talk | contribs) (Descriptive Stats and Graph)

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BME100 f2017:Group5 W0800 L3‎‎ (3 changes | history) . . (+2,331). . [Anna Hoge‎ (3×)]

     

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(cur | prev) . . (+160). . Anna Hoge (talk | contribs) (Inferential Stats and Analysis)

     

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(cur | prev) . . (+2,099). . Anna Hoge (talk | contribs) (Experimental Design of Own Device)

     

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(cur | prev) . . (+72). . Anna Hoge (talk | contribs) (Descriptive Stats and Graph)

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BME100 f2017:Group7 W0800 L3‎‎ (2 changes | history) . . (+26). . [Sayyed Ourmazd Mohseni‎; Miguel R. Almanza Lopez‎]

     

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(cur | prev) . . (-1). . Miguel R. Almanza Lopez (talk | contribs) (Design Flaws and Recommendations)

     

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(cur | prev) . . (+27). . Sayyed Ourmazd Mohseni (talk | contribs) (Descriptive Stats and Graph)