Ellis:Publications: Difference between revisions
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'''Click the links to read our papers''' | '''Click the links to read our papers''' | ||
<font face="trebuchet ms" style="color:#000000">We're in the lab right now working on new publications. '''Latest Update: MAR | <font face="trebuchet ms" style="color:#000000">We're in the lab right now working on new publications. '''Latest Update: MAR 2012''' | ||
<br> | <br> | ||
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! || Title !! Authors !! Published !! PDF !! Screenshot | ! || Title !! Authors !! Published !! PDF !! Screenshot | ||
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! Synthetic Biology Research | |||
| Rational Diversification of a Promoter Providing Fine-Tuned Expression and Orthogonal Regulation for Synthetic Biology | |||
| '''Blount BA, Weenink T, Vasylechko S, Ellis T''' | |||
| '''PLoS One''', March 2012 [http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0033279 DOI Link] | |||
| [http://openwetware.org/images/b/b7/TALORsPDF.pdf View PDF] | |||
| [[Image:TALORs.jpg|160px|right|PLos One]] | |||
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! Synthetic Biology Reviews | ! Synthetic Biology Reviews | ||
| Construction of synthetic regulatory networks in yeast | |||
| '''Blount BA, Weenink T, Ellis T''' | |||
| '''FEBS Letters''', Feb 2012 [http://dx.doi.org/10.1016/j.febslet.2012.01.053 DOI Link] | |||
| [http://openwetware.org/images/c/cd/FEBSEllis.pdf View PDF] | |||
| [[Image:YSRNreview.jpg|160px|right|FEBS Letters]] | |||
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! | |||
| DNA assembly for synthetic biology: from parts to pathways and beyond | | DNA assembly for synthetic biology: from parts to pathways and beyond | ||
| '''Ellis T''', Adie T, Baldwin GS | | '''Ellis T''', Adie T, Baldwin GS | ||
| '''Integrative | | '''Integrative Biology''', Feb 2011, Vol 3, Page 109 [http://dx.doi.org/10.1039/c0ib00070a DOI Link] | ||
| [http://openwetware.org/images/2/2e/EllisAssembly.pdf View PDF] | | [http://openwetware.org/images/2/2e/EllisAssembly.pdf View PDF] | ||
| [[Image:SynBioAssembly.jpg|160px|right|Integrative Biology]] | | [[Image:SynBioAssembly.jpg|160px|right|Integrative Biology]] | ||
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| Synthesis and screening of regulatory component libraries for synthetic biology | | Synthesis and screening of regulatory component libraries for synthetic biology | ||
| '''Ellis T''' | | '''Ellis T''' | ||
| '''Nature Protocols''', April 2009 [http:// | | '''Nature Protocols''', April 2009 [http://www.nature.com/protocolexchange/protocols/561 DOI Link] | ||
| [http://openwetware.org/images/9/94/Protocol.pdf View PDF] | | [http://openwetware.org/images/9/94/Protocol.pdf View PDF] | ||
| [[Image:ProtocolTom.jpg|160px|right|Nature Protocols]] | | [[Image:ProtocolTom.jpg|160px|right|Nature Protocols]] | ||
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|- | |- | ||
! Previous Publications by Tom Ellis | ! Previous Publications by Tom Ellis | ||
| Novel C8-linked pyrrolobenzodiazepine (PBD)-heterocycle conjugates that recognize DNA sequences containing an inverted CCAAT box | |||
| Brucoli F, Hawkins RM, James CH, Wells G, Jenkins TC, '''Ellis T''', Hartley JA, Howard PW, Thurston DE | |||
| '''Bioorg Med Chem Letters''', 2011, Vol 21, Page 3780 [http://dx.doi.org/10.1016/j.bmcl.2011.04.054] | |||
| [http://openwetware.org/images/7/7d/PBDpaper.pdf View PDF] | |||
| [[Image:PBDfootprint.jpg|160px|right|Bioorg Med Chem Lett]] | |||
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! | |||
| Molecular recognition of DNA by rigid [N]-polynorbornane derived bifunctional intercalators: synthesis and evaluation of their binding properties | | Molecular recognition of DNA by rigid [N]-polynorbornane derived bifunctional intercalators: synthesis and evaluation of their binding properties | ||
| Van Vliet LD, '''Ellis T''', Foley PJ, Liu L, Pfeffer FM, Russell RA, Warrener RN, Hollfelder F, Waring MJ | | Van Vliet LD, '''Ellis T''', Foley PJ, Liu L, Pfeffer FM, Russell RA, Warrener RN, Hollfelder F, Waring MJ | ||
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| '''Nucleic Acids Research''', 2007, Vol 35 [http://dx.doi.org/10.1093/nar/gkm467 DOI Link] | | '''Nucleic Acids Research''', 2007, Vol 35 [http://dx.doi.org/10.1093/nar/gkm467 DOI Link] | ||
| [http://openwetware.org/images/6/62/Footprinting.pdf View PDF] | | [http://openwetware.org/images/6/62/Footprinting.pdf View PDF] | ||
| [[Image: | | [[Image:96wellFootprint.jpg|160px|right|NAR]] | ||
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Revision as of 02:35, 20 March 2012
Click the links to read our papers
We're in the lab right now working on new publications. Latest Update: MAR 2012
Title | Authors | Published | Screenshot | ||
---|---|---|---|---|---|
Synthetic Biology Research | Rational Diversification of a Promoter Providing Fine-Tuned Expression and Orthogonal Regulation for Synthetic Biology | Blount BA, Weenink T, Vasylechko S, Ellis T | PLoS One, March 2012 DOI Link | View PDF | |
Synthetic Biology Reviews | Construction of synthetic regulatory networks in yeast | Blount BA, Weenink T, Ellis T | FEBS Letters, Feb 2012 DOI Link | View PDF | |
DNA assembly for synthetic biology: from parts to pathways and beyond | Ellis T, Adie T, Baldwin GS | Integrative Biology, Feb 2011, Vol 3, Page 109 DOI Link | View PDF | ||
Synthetic Biology by Tom Ellis | Diversity-based, model-guided construction of synthetic gene networks with predicted functions | Ellis T, Wang X, Collins JJ | Nature Biotechnology, April 2009, Vol 27, Page 465 DOI Link | View PDF | |
Gene regulation: hacking the network on a sugar high | Ellis T, Wang X, Collins JJ | Molecular Cell, 2008, Vol 30, Page 1 DOI Link | View PDF | ||
Synthesis and screening of regulatory component libraries for synthetic biology | Ellis T | Nature Protocols, April 2009 DOI Link | View PDF | ||
Previous Publications by Tom Ellis | Novel C8-linked pyrrolobenzodiazepine (PBD)-heterocycle conjugates that recognize DNA sequences containing an inverted CCAAT box | Brucoli F, Hawkins RM, James CH, Wells G, Jenkins TC, Ellis T, Hartley JA, Howard PW, Thurston DE | Bioorg Med Chem Letters, 2011, Vol 21, Page 3780 [1] | View PDF | |
Molecular recognition of DNA by rigid [N]-polynorbornane derived bifunctional intercalators: synthesis and evaluation of their binding properties | Van Vliet LD, Ellis T, Foley PJ, Liu L, Pfeffer FM, Russell RA, Warrener RN, Hollfelder F, Waring MJ | Journal of Medicinal Chemistry, 2007, Vol 50, Page 2326 DOI Link | View PDF | ||
A 96-well DNase I footprinting screen for drug-DNA interactions | Ellis T, Evans DA, Martin CR, Hartley JA | Nucleic Acids Research, 2007, Vol 35 DOI Link | View PDF | ||
Sequence-selective interaction of the minor-groove interstrand cross-linking agent SJG-136 with naked and cellular DNA: footprinting and enzyme inhibition studies | Martin C, Ellis T, McGurk CJ, Jenkins TC, Hartley JA, Waring MJ, Thurston DE | Biochemistry, 2005, Vol 44, Page 4135 DOI Link | View PDF | ||
DNase I footprinting of small molecule binding sites on DNA | Bailly C, Kluza J, Martin C, Ellis T, Waring MJ | Methods in Molecular Biology, 2005, Vol 288, Page 319 DOI Link | Book Chapter |