Difference between revisions of "Dionne"

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==Welcome to the Dionne lab!==
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That is to say, Marc Dionne's lab, at King's College London; not to be confused with any other Dionne lab.
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We are interested in (1) the effects of host genetics on the biology of infection; and (2) cytokine signalling and its effects on immune and non-immune tissues. ''Drosophila melanogaster'' is our animal model of choice.
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Work in the lab is funded by [http://www.bbsrc.ac.uk the Biotechnology and Biological Sciences Research Council] and [http://www.wellcome.ac.uk the Wellcome Trust].
  
==Welcome to the Dionne lab!==
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==We've moved!==
  
We are interested in (1) the effects of host genetics on the biology of infection; and (2) the physiological control of metabolic balance.
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The lab has moved from its original digs (on the 27th and 28th floors of Guy's Tower) across the street to New Hunt's House in order to be part of the new Centre for the Molecular and Cellular Biology of Inflammation. Our academic affiliation will be changing to the Peter Gorer Department of Immunobiology, DIIID, School of Medicine. Directions and postal addresses have been corrected on the [http://dionne.openwetware.org/Contact.html Contact] page.
  
 
==Host genetics and the biology of infection==
 
==Host genetics and the biology of infection==
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Different individuals show different levels of resistance to infections and develop different pathologies in response to infections. We are interested in why this is the case.  We use the fruitfly ''Drosophila melanogaster'' as a model host to study these questions; this allows us to screen for genes that affect the progress of infection in a rapid and unbiased fashion.
 
Different individuals show different levels of resistance to infections and develop different pathologies in response to infections. We are interested in why this is the case.  We use the fruitfly ''Drosophila melanogaster'' as a model host to study these questions; this allows us to screen for genes that affect the progress of infection in a rapid and unbiased fashion.
  
All of our experiments originate from a simple genetic screen. Mutant flies are infected with ''Mycobacterium marinum'', a bacterium closely-related to the causative agent of tuberculosis, or with ''Mycobacterium smegmatis'', a related non-pathogen. We select lines of flies that die more quickly or more slowly than wild-type controls and determine the mutation that gives rise to this phenotype. We then try to understand what this phenotype tells us about the function of the mutated gene.
+
All of our experiments originate from a simple genetic screen. Mutant flies are infected with ''Mycobacterium marinum'', a bacterium closely-related to the causative agent of tuberculosis, or with ''Mycobacterium smegmatis'', a related non-pathogen. We select lines of flies that die more quickly or more slowly than wild-type controls and identify the mutation that gives rise to this phenotype. We then try to understand what this phenotype tells us about the function of the mutated gene.
  
So far, our work on this system has focused on the mechanisms of pathogenesis. We have found that this infection causes progressive loss of metabolic stores, similar to the wasting seen in people with tuberculosis. We have shown that, in the fly, this wasting effect is caused partly by systemic failures in anabolic signals via the insulin effector kinase Akt. We are now working to try to understand how infection causes this defect in anabolic signalling. We also have mutants that affect other aspects of disease; we are working with these mutants to understand how the fly immune system fights Mycobacterial infections as well as other aspects of disease pathogenesis.
+
So far, our work on this system has focused on the mechanisms of pathogenesis. We have found that this infection causes progressive loss of metabolic stores, similar to the wasting seen in people with tuberculosis. We have shown that, in the fly, this wasting effect is caused partly by systemic failures in anabolic signals via the insulin effector kinase Akt. We are now working to try to understand how infection causes this defect in anabolic signalling. We also have mutants that affect other aspects of disease; we are working with these mutants to understand other aspects of disease pathogenesis as well as how the fly immune system fights Mycobacterial infections.
  
==Physiological control of metabolic balance==
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==Cytokines and cytokine signalling==
  
As mentioned above, we've found that infection with ''M marinum'' causes serious metabolic defects in ''Drosophila''. At least some of these effects are due to changes in signalling pathways whose roles in metabolic control are largely unexplored or completely unknown. This has led us to examine the roles of these pathways in metabolic control in healthy animals so that we can then understand the effects of infection-induced perturbation of these pathways.
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In the course of screening, we find a lot of molecules and pathways that end up being involved in cytokine signalling and its consequences. One aspect of this is the metabolic effects of infection, which appear to result from high levels of cytokine expression over several days. Cytokines also regulate the realized immune response of the fly, much as they do in mammals.
  
This work is preliminary but is very exciting - we hope to be able to say more soon!
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We've recently published some of this work in "Current Biology", showing that two different TGF-betas regulate fly immunity, each inhibiting a specific arm of the immune response, and each being produced by only a subset of phagocytes. [http://www.ncbi.nlm.nih.gov/pubmed/21962711 Check it out!]
  
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==Recent updates to the lab wiki==
 
==Recent updates to the lab wiki==
 
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This page was created using [http://www.openwetware.org Open Wetware].</nonwikionly>

Revision as of 12:27, 12 November 2011

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About Us       Protocols &c.       Lab Members       Publications       Contact       Links


Welcome to the Dionne lab!

That is to say, Marc Dionne's lab, at King's College London; not to be confused with any other Dionne lab.

We are interested in (1) the effects of host genetics on the biology of infection; and (2) cytokine signalling and its effects on immune and non-immune tissues. Drosophila melanogaster is our animal model of choice.

Work in the lab is funded by the Biotechnology and Biological Sciences Research Council and the Wellcome Trust.

We've moved!

The lab has moved from its original digs (on the 27th and 28th floors of Guy's Tower) across the street to New Hunt's House in order to be part of the new Centre for the Molecular and Cellular Biology of Inflammation. Our academic affiliation will be changing to the Peter Gorer Department of Immunobiology, DIIID, School of Medicine. Directions and postal addresses have been corrected on the Contact page.

Host genetics and the biology of infection

Different individuals show different levels of resistance to infections and develop different pathologies in response to infections. We are interested in why this is the case. We use the fruitfly Drosophila melanogaster as a model host to study these questions; this allows us to screen for genes that affect the progress of infection in a rapid and unbiased fashion.

All of our experiments originate from a simple genetic screen. Mutant flies are infected with Mycobacterium marinum, a bacterium closely-related to the causative agent of tuberculosis, or with Mycobacterium smegmatis, a related non-pathogen. We select lines of flies that die more quickly or more slowly than wild-type controls and identify the mutation that gives rise to this phenotype. We then try to understand what this phenotype tells us about the function of the mutated gene.

So far, our work on this system has focused on the mechanisms of pathogenesis. We have found that this infection causes progressive loss of metabolic stores, similar to the wasting seen in people with tuberculosis. We have shown that, in the fly, this wasting effect is caused partly by systemic failures in anabolic signals via the insulin effector kinase Akt. We are now working to try to understand how infection causes this defect in anabolic signalling. We also have mutants that affect other aspects of disease; we are working with these mutants to understand other aspects of disease pathogenesis as well as how the fly immune system fights Mycobacterial infections.

Cytokines and cytokine signalling

In the course of screening, we find a lot of molecules and pathways that end up being involved in cytokine signalling and its consequences. One aspect of this is the metabolic effects of infection, which appear to result from high levels of cytokine expression over several days. Cytokines also regulate the realized immune response of the fly, much as they do in mammals.

We've recently published some of this work in "Current Biology", showing that two different TGF-betas regulate fly immunity, each inhibiting a specific arm of the immune response, and each being produced by only a subset of phagocytes. Check it out!

<wikionly>

Recent updates to the lab wiki

17 June 2018

     18:03  OpenSourceTB:Compound Series‎ (diff | hist) . . (+94). . Matthew Todd (talk | contribs)

     18:02 

OpenSourceTB:OSTB Series 1‎‎ (6 changes | history) . . (-2,153). . [Matthew Todd‎ (⧼ntimes⧽)]

     

18:02

(cur | prev) . . (-209). . Matthew Todd (talk | contribs) (Data for this Page)

     

18:01

(cur | prev) . . (-231). . Matthew Todd (talk | contribs) (Preliminary Work on the Series Outside GSK)

     

17:58

(cur | prev) . . (-87). . Matthew Todd (talk | contribs) (Other Sources of These, or Similar, Compounds)

     

17:57

(cur | prev) . . (-461). . Matthew Todd (talk | contribs) (Project 3)

     

17:52

(cur | prev) . . (-730). . Matthew Todd (talk | contribs) (Project 1)

     

17:47

(cur | prev) . . (-435). . Matthew Todd (talk | contribs) (Project 2)

15 June 2018

     16:52  User:Gareth Trubl‎ (diff | hist) . . (+66). . Gtrubl (talk | contribs)

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The Essential Unknowns/Set Theories‎‎ (3 changes | history) . . (+149). . [Koeng‎ (⧼ntimes⧽)]

     

13:44

(cur | prev) . . (-19). . Koeng (talk | contribs)

     

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13:40

(cur | prev) . . (+89). . Koeng (talk | contribs) (Created page with "A placeholder for thoughts and framing of how to figure out what the essential genes are.")

     13:35 

The Essential Unknowns‎‎ (10 changes | history) . . (+137). . [Koeng‎ (⧼ntimes⧽)]

     

13:35

(cur | prev) . . (-1). . Koeng (talk | contribs) (How to participate)

     

13:35

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     12:57 (Upload log) . . Koeng (talk | contribs) uploaded File:JCVI-syn3-cells.jpg(A picture of the JCVI syn3 cell line)
     07:57  Hoatlin:BMB seminar series 2017-2018‎ (diff | hist) . . (+50). . Millejef (talk | contribs)

14 June 2018

     19:47  X-Lab‎ (diff | hist) . . (+80). . ChanEngr (talk | contribs)

N    17:57 

The Essential Unknowns‎‎ (4 changes | history) . . (+445). . [Koeng‎ (⧼ntimes⧽)]

     

17:57

(cur | prev) . . (-1,217). . Koeng (talk | contribs)

     

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16:14

(cur | prev) . . (+186). . Koeng (talk | contribs) (Created page with "This is a placeholder for The Essential Unknowns wiki project. ==Background== [https://example.com The Essential gene set and the Minimal organism?]<br> [https://example.co...")

 m   16:51  User:Korey Griffin‎ (diff | hist) . . (+272). . Korey Griffin (talk | contribs)

     16:37 

(User creation log). .

[Yar‎ (⧼ntimes⧽)]

     

16:37

. . User account Millejef (talk | contribs) was created by Yar (talk | contribs) and password was sent by email ‎

     

10:23

. . User account Advancells (talk | contribs) was created by Yar (talk | contribs) and password was sent by email ‎

     

10:23

. . User account Thembani (talk | contribs) was created by Yar (talk | contribs) and password was sent by email ‎

     13:24 

User:JernejTurnsek‎‎ (5 changes | history) . . (+171). . [Jernej Turnsek‎ (⧼ntimes⧽)]

     

13:24

(cur | prev) . . (+127). . Jernej Turnsek (talk | contribs) (Resources)

     

12:24

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12:23

(cur | prev) . . (+17). . Jernej Turnsek (talk | contribs)

     

12:06

(cur | prev) . . (+15). . Jernej Turnsek (talk | contribs) (Lab)

     

07:39

(cur | prev) . . (+14). . Jernej Turnsek (talk | contribs) (My PhD project in plain English)

     12:05 

(Upload log). .

[Yar‎; Jernej Turnsek‎]

     

12:05

. . Jernej Turnsek (talk | contribs) uploaded File:Turnsek CV.pdf

     

09:58

. . Yar (talk | contribs) uploaded File:OPB-192-DX.jpg(temp)

     11:12 

Beauchamp:CorticalSurfaceHCP‎‎ (7 changes | history) . . (+2,639). . [Meghanr‎ (⧼ntimes⧽)]

     

11:12

(cur | prev) . . (+28). . Meghanr (talk | contribs) (Resampling to functional space)

     

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     10:18 (Deletion log) . . Yar (talk | contribs) deleted page File:OPB-192-DX.jpg(it was just a test)

13 June 2018

     18:22  X-Lab‎ (diff | hist) . . (+299). . ChanEngr (talk | contribs)

     17:12 

User:JernejTurnsek‎‎ (2 changes | history) . . (-120). . [Jernej Turnsek‎ (⧼ntimes⧽)]

     

17:12

(cur | prev) . . (-53). . Jernej Turnsek (talk | contribs) (Sports)

     

17:04

(cur | prev) . . (-67). . Jernej Turnsek (talk | contribs) (Lab)

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