Dent Lab:Reprints

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Recent Publications

Lin W, Srajer G, Evrard YA, Phan HM, Furuta Y, Dent SY. (2007) Developmental potential of Gcn5(-/-) embryonic stem cells in vivo and in vitro. Dev Dyn. Jun;236(6):1547-57. Abstract

Bu P, Evrard YA, Lozano G, Dent SY. (2007) Loss of Gcn5 acetyltransferase activity leads to neural tube closure defects and exencephaly in mouse embryos. Mol Cell Biol. May;27(9):3405-16. Abstact

Chosed R, Dent SY. (2007) A two-way street: LSD1 regulates chromatin boundary formation in S. pombe and Drosophila. Mol Cell. Apr 27;26(2):160-2. Preview Abstract

Malave TM, Dent SY. (2006) Transcriptional repression by Tup1-Ssn6. Biochem Cell Biol. 2006 Aug;84(4):437-43. Review. Abstract

Lin W, Dent SY. (2006) Functions of histone-modifying enzymes in development. Curr Opin Genet Dev. Apr 16(2):137-42. Review. Abstract

Davie JK, Dent SY. (2006) No Spt6, no nucleosomes, no activator required. Mol Cell. Feb 17;21(4):452-3. Preview. Abstract

Tripic T, Edmondson DG, Davie JK, Strahl BD, Dent SY. (2006) The Set2 methyltransferase associates with Ssn6 yet Tup1-Ssn6 repression is independent of histone methylation. Biochem Biophys Res Commun. Jan 20;339(3):905-14. Abstract

Zhang K, Dent SY. (2005) Histone modifying enzymes and cancer: going beyond histones. J Cell Biochem. Dec 15;96(6):1137-48. Review. Abstract

Zhang K, Lin W, Latham JA, Riefler GM, Schumacher JM, Chan C, Tatchell K, Hawke DH, Kobayashi R, Dent SY. (2005) The Set1 methyltransferase opposes Ipl1 aurora kinase functions in chromosome segregation. Cell. Sep 9;122(5):723-34. Abstract

Phan HM, Xu AW, Coco C, Srajer G, Wyszomierski S, Evrard YA, Eckner R, Dent SY. (2005) GCN5 and p300 share essential functions during early embryogenesis. Dev Dyn. Aug; 233(4):1337-47. Abstract

Davie JK Dent SY. (2004) Histone modifications in corepressor functions. Curr Top Dev Biol. 59:145-63. Review. No abstract available.

Davie JK, Edmondson DG, Coco CB, Dent SY. (2003) Tup1-Ssn6 interacts with multiple class I histone deacetylases in vivo. J Biol Chem. 2003 Dec 12;278(50):50158-62 Abstract
[Protocols/oligo_davie_jbc.html Oligos used in paper]

Coombes MM, Briggs KL, Bone JR, Clayman GL, El-Naggar AK, Dent SY. (2003) Resetting the histone code at CDKN2A in HNSCC by inhibition of DNA methylation. Oncogene. Dec 4;22(55):8902-11. [1]

Fujii S, Luo RZ, Yuan J, Kadota M, Oshimura M, Dent SR, Kondo Y, Issa JP, Bast RC Jr, Yu Y. (2003) Reactivation of the silenced and imprinted alleles of ARHI is associated with increased histone H3 acetylation and decreased histone H3 lysine 9 methylation. Hum Mol Genet. Aug 1;12(15):1791-800. Abstract

Liu X, Tesfai J, Evrard YA, Dent SY, Martinez E. (2003) c-Myc transformation domain recruits the human STAGA complex and requires TRRAP and GCN5 acetylase activity for transcription activation. J Biol Chem. May 30;278(22):20405-12. Abstract

Mukai Y, Davie JK, Dent SY. (2003) Physical and functional interaction of the yeast corepressor Tup1 with mRNA 5'-triphosphatase. J Biol Chem. May 23;278(21):18895-901 [

Yu Y, Fujii S, Yuan J, Luo RZ, Wang L, Bao J, Kadota M, Oshimura M, Dent SR, Issa JP, Bast RC Jr. (2003) Epigenetic regulation of ARHI in breast and ovarian cancer cells. Ann N Y Acad Sci. Mar;983:268-77. Review. Abstract

Edmondson DG, Davie JK, Zhou J, Mirnikjoo B, Tatchell K, Dent SY. (2002) Site-specific loss of acetylation upon phosphorylation of histone H3. J Biol Chem. Aug 16;277(33):29496-502. Abstract

Davie JK, Trumbly RJ, Dent SY. (2002) Histone-dependent association of Tup1-Ssn6 with repressed genes in vivo. Mol Cell Biol.Feb;22(3):693-703. Abstract

Davie JK, Dent SY. (2002) Transcriptional control: an activating role for arginine methylation. Curr Biol. Jan 22;12(2):R59-61. Abstract

Briggs SD, Bryk M, Strahl BD, Cheung WL, Davie JK, Dent SY, Winston F, Allis CD. (2001) Histone H3 lysine 4 methylation is mediated by Set1 and required for cell growth and rDNA silencing in Saccharomyces cerevisiae. Genes Dev. Dec 15;15(24):3286-95. Abstract

Marmorstein R, Roth SY. (2001) Histone acetyltransferases: function, structure, and catalysis. Curr Opin Genet Dev. Apr;11(2):155-61. Review. Abstract

Bone, J.R. and Roth, S.Y. (2001) Recruitment of the yeast Tup1-Ssn6 repressor is associated with localized decreases in histone acetylation. J. Biol. Chem. 276: 1808-1813. Abstract

Roth SY, Denu JM, Allis CD. (2001) Histone acetyltransferases. Annu Rev Biochem. 70:81-120. Review. Abstract

Bone JR, Roth SY. (2001) Corepressor proteins and control of transcription in yeast. Curr Top Microbiol Immunol. 2001;254:59-78. Review. No abstract available.

Roth, D.B. and Roth, S.Y. (2000) Unequal access: Regulating V(D)J recombination through chromatin remodeling. Cell 103: 699-702. Abstract

Watson, A.D., Edmondson, D.G., Bone, J.R., Mukai, Y., Yu, Y., Du, W., Stillman, D.J., and Roth, S.Y. (2000) Ssn6-Tup1 Interacts with Class I Histone Deacetylases Required for Repression. Genes Dev. 14: 2737-2744. Abstract

Xu, W., Edmondson, D.E., Evrard, Y.A., Wakamiya, W., Behringer, R.R., and Roth, S.Y. (2000) Loss of GCN512 Leads to Increased Apoptosis and Mesodermal Defects During Mouse Development. Nature Genetics 26: 229-232. Abstract

Mukai Y, Matsuo E, Roth SY, Harashima S. (1999) Conservation of histone binding and transcriptional repressor functions in a Schizosaccharomyces pombe Tup1p homolog. Mol Cell Biol. Dec;19(12):8461-8. Abstract

Xu W, Edmondson DG, Roth SY. (1998) Mammalian GCN5 and P/CAF acetyltransferases have homologous amino-terminal domains important for recognition of nucleosomal substrates. Mol Cell Biol. Oct;18(10):5659-69. Abstract

Edmondson DG, Roth SY. (1998) Interactions of transcriptional regulators with histones. Methods. Aug;15(4):355-64. Abstract

Zhang W, Bone JR, Edmondson DG, Turner BM, Roth SY. (1998) Essential and redundant functions of histone acetylation revealed by mutation of target lysines and loss of the Gcn5p acetyltransferase. EMBO J. Jun 1;17(11):3155-67.Abstract

Edmondson DG, Zhang W, Watson A, Xu W, Bone JR, Yu Y, Stillman D, Roth SY. (1998) In vivo functions of histone acetylation/deacetylation in Tup1p repression and Gcn5p activation. Cold Spring Harb Symp Quant Biol. 1998;63:459-68. No abstract available.

Huang L, Zhang W, Roth SY. (1997) Amino termini of histones H3 and H4 are required for a1-alpha2 repression in yeast. Mol Cell Biol. Nov;17(11):6555-62. Abstract

Macatee T, Jiang YW, Stillman DJ, Roth SY. (1997) Global alterations in chromatin accessibility associated with loss of SIN4 function. Nucleic Acids Res. Mar 15;25(6):1240-7. Abstract

15: Roth SY, Allis CD. Related Articles, Links No abstract Histone acetylation and chromatin assembly: a single escort, multiple dances? Cell. 1996 Oct 4;87(1):5-8. Review. No abstract available. PMID: 8858142 [PubMed - indexed for MEDLINE] 16: Roth SY, Allis CD. Related Articles, Links Abstract The subunit-exchange model of histone acetylation. Trends Cell Biol. 1996 Oct;6(10):371-5. PMID: 15157517 [PubMed] 17: Kuo MH, Brownell JE, Sobel RE, Ranalli TA, Cook RG, Edmondson DG, Roth SY, Allis CD. Related Articles, Links Abstract Transcription-linked acetylation by Gcn5p of histones H3 and H4 at specific lysines. Nature. 1996 Sep 19;383(6597):269-72. PMID: 8805705 [PubMed - indexed for MEDLINE] 18: Roth SY. Related Articles, Links No abstract Something about silencing. Nat Genet. 1996 Sep;14(1):3-4. No abstract available. PMID: 8782807 [PubMed - indexed for MEDLINE] 19: Edmondson DG, Roth SY. Related Articles, Links Free Full Text Chromatin and transcription. FASEB J. 1996 Aug;10(10):1173-82. Review. PMID: 8751719 [PubMed - indexed for MEDLINE] 20: Edmondson DG, Smith MM, Roth SY. Related Articles, Links Free Full Text Repression domain of the yeast global repressor Tup1 interacts directly with histones H3 and H4. Genes Dev. 1996 May 15;10(10):1247-59. PMID: 8675011 [PubMed - indexed for MEDLINE] 21: Brownell JE, Zhou J, Ranalli T, Kobayashi R, Edmondson DG, Roth SY, Allis CD. Related Articles, Links Abstract Tetrahymena histone acetyltransferase A: a homolog to yeast Gcn5p linking histone acetylation to gene activation. Cell. 1996 Mar 22;84(6):843-51. PMID: 8601308 [PubMed - indexed for MEDLINE] 22: Roth SY. Related Articles, Links Abstract Chromatin-mediated transcriptional repression in yeast. Curr Opin Genet Dev. 1995 Apr;5(2):168-73. Review. PMID: 7613085 [PubMed - indexed for MEDLINE]