Dahlquist:Courses
This information can also be found at the Dahlquist Lab Courses page at Loyola Marymount University.
Spring 2012
Dr. Dahlquist is on sabbatical for Spring 2012.
Fall 2011 Courses
Biology 201: Cell Function
Section BIOL 201-01: MWF 9:00-9:50 AM, Pereira 140
Section BIOL 201-03: MWF 10:00-10:50 PM, Pereira 207
Description: The purpose of this course is to introduce students to the core concepts of cellular biology that needed to succeed in upper-division biology courses. The overall theme for this course is how structure implies function for macromolecules and cells. Course topics include: cellular and sub-cellular structures and functions, DNA and RNA structure and function, protein synthesis and structure, enzyme function, metabolic pathways, and membrane function.
Currents Students: For syllabus and course information login to MyLMU Connect, formerly known as Blackboard (or via MYLMU)
Biology 368: Bioinformatics Laboratory
Section BIOL 368-01: W 1:00-4:50 PM, Seaver 120
Previous Courses
- Spring 2011 Courses
- Biology 398-01: Biomathematical Modeling/Mathematics 388-01: Survey of Biomathematics
- Fall 2010 Courses
- Biology 201-01, -02: Cell Function
- Protein Structure Exploration exercises are hosted here on this wiki. NOTE: these are currently under construction.
- Biology / Computer Science 367-01/ Honors 398-05: Biological Databases
- Biology 201-01, -02: Cell Function
- Spring 2010 Courses
- Biology 398-01: Bioinformatics Laboratory
- Biology 478: Molecular Biology of the Genome
- Fall 2009 Courses
- Biology 201-01, -02: Cell Function
- Biology / Computer Science / Honors 398-01: Biological Databases
- Course wiki (for students in the course only).
- Spring 2009 Courses
- Biology 478: Molecular Biology of the Genome
- Honors 240-01: On the Nature of Things
- Course Google Site (for students in the course only).
- Fall 2008 Courses
- Biology 201-01: Cell Function
- Biology / Computer Science / Honors 398-01: Biological Databases
- Biology 398-01: Bioinformatics Laboratory
- Course Google Site (for students in the course only).
Problem Space: Analysis of Prostate Cancer DNA Microarray Data
- GenMAPP and MAPPFinder are available from http://www.genmapp.org
- Data for this exercise was published in this paper:
- Review article on prostate cancer:
- GenMAPP Prostate Cancer Exercise Part 1
- This is the link to the data file, <Hs_ED_ProstateCancer_edited.txt>, mentioned in step 3 of the protocol.
- GenMAPP Prostate Cancer Exercise Part 2 (MAPPFinder)
- This part of the exercise can be completed independently of Part 1 by downloading the GenMAPP Expression Dataset <Hs_ED_ProstateCancer_20060130.gex> from GenMAPP.org using the Data Acquisition Tool from within the GenMAPP program.
- Launch GenMAPP.
- Select the menu item, Data > Download Data from GenMAPP.org
- Expand the "Expression Datasets" folder, and click on "Homo sapiens" to see the file.
- Check the box next to the filename.
- Click the Start button to download.