Cfrench:hemlist1

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Genera of bacteria and archaea with hemerythrin-like genes

Based on searches performed during November 2006.

Genus family order class/phylum number of hemerythrins
Acidobacteria sp. Acidobacteriaeae Acidobacteriales Acidobacteria 4
Acidovorax Comamonadaceae Burkholderiales Betaproteobacteria 1,3
Aeromonas Aeromonadaceae Aeromonadales Gammaproteobacteria 2
Alcanivorax Alcanivoraceae Oceanospirillales Gammaproteobacteria 1
Alkalilimnicola Ectothiorhodospiraceae Chromatiales Gammaproteobacteria 2
Anaeromyxobacter Myxococcaceae Myxococcales Deltaproteobacteria 8
Aquifex Aquificaceae Aquificales Aquificae 1
Azotobacter Pseudomonadaceae Pseudomonadales Gammaproteobacteria 1
Bdellovibrio Bdellovibrionaceae Bdellovibrionales Deltaproteobacteria 1
Bordetella Alcaligenaceae Burkholderiales Betaproteobacteria 1
Burkholderia Burkholderiaceae Burkholderiales Betaproteobacteria 23 strains 1 each, 1 strain has 3
Campylobacter Campylobacteraceae Campylobacterales Epsilonproteobacteria 7, 2, 6, 3, 5, 5, 5, 5, 3, 2, 2, 5
Caldocellulosiruptor Syntrophomonadaceae Clostridiales Clostridia, Firmicutes 1
Clostridium Clostridicaeae Clostridiales Clostridia, Firmicutes 1, 6, 5, 1, 2
Colwellia Colwelliaceae Alteromonadales Gammaproteobacteria 7
Comamonas Comamonadaceae Burkholderiales Betaproteobacteria 4
Dechloromonas Rhodocyclaceae Rhodocyclales Betaproteobacteria 10
Desulfitobacterium Peptococcaceae Clostridiales Clostridia, Firmicutes 2, 2
Desulfotalea Desulfobulbaceae Desulfobacterales Deltaproteobacteria 3
Desulfovibrio Desulfovibrionaceae Desulfovibrionales Deltaproteobacteria 3, 4, 4
Desulfuromonas Desulfuromonadaceae Desulfuromonadales Deltaproteobacteria 10
Leuwenhoekiella Flavobacteriaceae Flavobacteriales Flavobacteria, Bacteroidetes 1
Geobacter Geobacteraceae Desulfuromonadales Deltaproteobacteria 2, 2, 2, 5
Haloarcula Halobacteriaceae Halobacteriales Halobacteria, Euryarchaeota 1
Halorhodospira Ectothiorhodospiraceae Chromatiales Gammaproteobacteria 1
Helicobacter Helicobacteraceae Campylobacterales Epsilonproteobacteria 2
Hydrogenobacter Aquificaceae Aquificales Aquificae 1
Idiomarina Idiomarinaceae Alteromonadales Gammaproteobacteria 1, 1
Janthinobacterium Oxalobacteraceae Burkholderiales Betaproteobacteria 1 or 2
Kuenenia Planctomycetales Planctomycetes 2
Magnetococcus Proteobacteria 14 to 19
Magnetospirillum Rhodospirillaceae Rhodospirillales Alphaproteobacteria approx 29, 29
Mariprofundus Proteobacteria 1
Mesorhizobium Phyllobacteriaceae Rhizobiales Alphaproteobacteria 1
Methanocaldococcus Methanocaldococcaceae Methanococcales Methanococci, Euryarchaeota 1
Methanospirillum Methanospirillaceae Methanomicrobiales Methanomicrobia, Euryarchaeota 2
Methylococcus Methylococcaceae Methylococcales Gammaproteobacteria 1
MLMS1 Deltaprotebacteria 5?
Oceanospirillum Oceanospirillales Gammaproteobacteria 3
Pelobacter Pelobacteraceae Desulfuromonadales Deltaproteobacteria 3, 1
Polaromonas Comamonadaceae Burkholderiales Betaproteobacteria 3
Pseudomonas Pseudomonadaceae Pseudomonadales Gammaproteobacteria 8 strains, 1 each
Ralstonia Burkholderiaceae Burkholderiales Betaproteobacteria 2, 2, 1
Reinekea Gammaproteobacteria 2
Rhodoferax Comamonadaceae Burkholderiales Betaproteobacteria 2,2
Rhodopseudomonas Bradyrhizobiaceae Rhizobiales Alphaproteobacteria 1, 1, 1
Rhodospirillum Rhodospirillaceae Rhodospirillales Alphaproteobacteria 6
Shewanella Shewanellaceae Alteromonadales Gammaproteobacteria 11 strains, 1 each
Solibacter Solibacteraceae Solibacterales Solibacteres, Acidobacteria 3
Symbiobacterium Actinobacteria 1
Syntrophomonas Syntrophomonadaceae Clostridiales Clostridia, Firmicutes 1
Thermoanaerobacter Thermoanaerobacteriaceae Thermoanaerobacteriales Clostridia, Firmicutes 1
Thermosynechococcus Chroococcales Cyanobacteria 2
Thiomicrospira Helicobacteraceae Campylobacterales Epsilonproteobacteria 1
Verminephrobacter Comamonadaceae Burkholderiales Betaproteobacteria 1
Vibrio Vibrionaceae Vibrionales Gammaproteobacteria 8 strains, 1 each
Wolinella Helicobacteraceae Campylobacterales Epsilonproteobacteria 1
Xanthomonas Xanthomonadaceae Xanthomonadales Gammaproteobacteria 1, 1, 1, 1

List ordered taxonomically

Genus family order class/phylum number of hemerythrins
Acidobacteria sp. Acidobacteriaeae Acidobacteriales Acidobacteria 4
Solibacter Solibacteraceae Solibacterales Solibacteres, Acidobacteria 3
Aquifex Aquificaceae Aquificales Aquificae 1
Hydrogenobacter Aquificaceae Aquificales Aquificae 1
Rhodopseudomonas Bradyrhizobiaceae Rhizobiales Alphaproteobacteria 1, 1, 1
Mesorhizobium Phyllobacteriaceae Rhizobiales Alphaproteobacteria 1
Magnetospirillum Rhodospirillaceae Rhodospirillales Alphaproteobacteria approx 29, 29
Rhodospirillum Rhodospirillaceae Rhodospirillales Alphaproteobacteria 6
Magnetococcus Alphaproteobacteria 14 to 19
Bordetella Alcaligenaceae Burkholderiales Betaproteobacteria 1
Burkholderia Burkholderiaceae Burkholderiales Betaproteobacteria 23 strains 1 each, 1 strain has 3
Ralstonia Burkholderiaceae Burkholderiales Betaproteobacteria 2, 2, 1
Acidovorax Comamonadaceae Burkholderiales Betaproteobacteria 1,3
Comamonas Comamonadaceae Burkholderiales Betaproteobacteria 4
Polaromonas Comamonadaceae Burkholderiales Betaproteobacteria 3
Rhodoferax Comamonadaceae Burkholderiales Betaproteobacteria 2,2
Verminephrobacter Comamonadaceae Burkholderiales Betaproteobacteria 1
Janthinobacterium Oxalobacteraceae Burkholderiales Betaproteobacteria 1 or 2
Dechloromonas Rhodocyclaceae Rhodocyclales Betaproteobacteria 10
Aeromonas Aeromonadaceae Aeromonadales Gammaproteobacteria 2
Colwellia Colwelliaceae Alteromonadales Gammaproteobacteria 7
Idiomarina Idiomarinaceae Alteromonadales Gammaproteobacteria 1, 1
Shewanella Shewanellaceae Alteromonadales Gammaproteobacteria 11 strains, 1 each
Alkalilimnicola Ectothiorhodospiraceae Chromatiales Gammaproteobacteria 2
Halorhodospira Ectothiorhodospiraceae Chromatiales Gammaproteobacteria 1
Methylococcus Methylococcaceae Methylococcales Gammaproteobacteria 1
Oceanospirillum Oceanospirillales Gammaproteobacteria 3
Alcanivorax Alcanivoraceae Oceanospirillales Gammaproteobacteria 1
Azotobacter Pseudomonadaceae Pseudomonadales Gammaproteobacteria 1
Pseudomonas Pseudomonadaceae Pseudomonadales Gammaproteobacteria 8 strains, 1 each
Vibrio Vibrionaceae Vibrionales Gammaproteobacteria 8 strains, 1 each
Xanthomonas Xanthomonadaceae Xanthomonadales Gammaproteobacteria 1, 1, 1, 1
Reinekea Gammaproteobacteria 2
Bdellovibrio Bdellovibrionaceae Bdellovibrionales Deltaproteobacteria 1
Desulfotalea Desulfobulbaceae Desulfobacterales Deltaproteobacteria 3
Desulfovibrio Desulfovibrionaceae Desulfovibrionales Deltaproteobacteria 3, 4, 4
Desulfuromonas Desulfuromonadaceae Desulfuromonadales Deltaproteobacteria 10
Geobacter Geobacteraceae Desulfuromonadales Deltaproteobacteria 2, 2, 2, 5
Pelobacter Pelobacteraceae Desulfuromonadales Deltaproteobacteria 3, 1
Anaeromyxobacter Myxococcaceae Myxococcales Deltaproteobacteria 8
MLMS1 Deltaprotebacteria 5?
Campylobacter Campylobacteraceae Campylobacterales Epsilonproteobacteria 7, 2, 6, 3, 5, 5, 5, 5, 3, 2, 2, 5
Helicobacter Helicobacteraceae Campylobacterales Epsilonproteobacteria 2
Thiomicrospira Helicobacteraceae Campylobacterales Epsilonproteobacteria 1
Wolinella Helicobacteraceae Campylobacterales Epsilonproteobacteria 1
Mariprofundus Proteobacteria 1
Clostridium Clostridicaeae Clostridiales Clostridia, Firmicutes 1, 6, 5, 1, 2
Desulfitobacterium Peptococcaceae Clostridiales Clostridia, Firmicutes 2, 2
Caldocellulosiruptor Syntrophomonadaceae Clostridiales Clostridia, Firmicutes 1
Syntrophomonas Syntrophomonadaceae Clostridiales Clostridia, Firmicutes 1
Thermoanaerobacter Thermoanaerobacteriaceae Thermoanaerobacteriales Clostridia, Firmicutes 1
Leuwenhoekiella Flavobacteriaceae Flavobacteriales Flavobacteria, Bacteroidetes 1
Kuenenia Planctomycetales Planctomycetes 2
Symbiobacterium Actinobacteria 1
Thermosynechococcus Chroococcales Cyanobacteria 2
Haloarcula Halobacteriaceae Halobacteriales Halobacteria, Euryarchaeota 1
Methanocaldococcus Methanocaldococcaceae Methanococcales Methanococci, Euryarchaeota 1
Methanospirillum Methanospirillaceae Methanomicrobiales Methanomicrobia, Euryarchaeota 2


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