CHE.496/2008/Schedule: Difference between revisions

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==Module 1 - Fundamentals of synthetic biology==
==Module 1 - Fundamentals of synthetic biology==
<font color=blue>
<font color=blue>
* Jan 17 - Course introduction
* Jan 17 - Synthetic biology overview
* Jan 22 - Synthetic biology overview
* Jan 22 - Foundational technologies
* Jan 24 - Foundational technologies
* Jan 24 - Engineering principles
* Jan 29 - Engineering principles
* Jan 29 - Biobricks and genetic programming
* Jan 31 - Biobricks and genetic programming
* Jan 31 - Bioinformatics and online databases
* Feb 05 - Bioinformatics and online databases
* Feb 05 - Practical applications
* Feb 07 - Practical applications
* Feb 07 - Societal implications </font>
* Feb 12 - Biological safety and security
* Feb 12 - '''Oral presentations of individual literature research'''
* Feb 14 - Ownership and sharing
* Feb 14 - '''Oral presentations of individual literature research'''
</font>


==Module 2 - Engineered biological systems==
==Module 2 - Engineered biological systems==
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* Feb 19 - Synthetic genes, biological machines, and minimal genomes
* Feb 19 - Synthetic genes, biological machines, and minimal genomes
* Feb 21 - Case studies in synthetic biology
* Feb 21 - Case studies in synthetic biology
* Feb 26 - '''Oral presentations of literature research'''
* Feb 26 - Genetic circuit engineering
* Feb 28 - '''Oral presentations of literature research'''</font>
* Feb 28 - Genetic circuit engineering </font>
* Mar 04 - ''Spring break''
* Mar 04 - ''Spring break''
* Mar 06 - ''Spring break''<font color=green>
* Mar 06 - ''Spring break'' <font color=green>
* Mar 11 - Genetic circuit engineering
* Mar 11 - Metabolic pathway engineering
* Mar 13 - Genetic circuit engineering
* Mar 13 - Metabolic pathway engineering
* Mar 18 - Metabolic pathway engineering
* Mar 18 - Biological network engineering </font>
* Mar 20 - Metabolic pathway engineering
* Mar 20 - '''Oral presentations of individual part design'''
* Mar 25 - Biological network engineering
* Mar 25 - '''Oral presentations of individual part design'''
</font>


==Module 3 - Systems biology and modeling==
==Module 3 - Systems biology and modeling==
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* Apr 10 - Genome-scale metabolic models
* Apr 10 - Genome-scale metabolic models
* Apr 15 - Modeling genetic regulatory networks
* Apr 15 - Modeling genetic regulatory networks
* Apr 17 - Systems biotechnology
* Apr 17 - Systems biotechnology </font>
* Apr 22 - '''Oral presentations of original project design'''
* Apr 22 - '''Oral presentations of group system design'''
* Apr 24 - '''Oral presentations of original project design'''
* Apr 24 - '''Oral presentations of group system design'''
* Apr 29 - '''Review of course'''
* Apr 29 - '''Review of course'''
</font>

Revision as of 08:18, 8 August 2007

CHE.496: Biological Systems Design Seminar

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This site is under development and this course is just a proposal at this point in time.

Module 1 - Fundamentals of synthetic biology

  • Jan 17 - Synthetic biology overview
  • Jan 22 - Foundational technologies
  • Jan 24 - Engineering principles
  • Jan 29 - Biobricks and genetic programming
  • Jan 31 - Bioinformatics and online databases
  • Feb 05 - Practical applications
  • Feb 07 - Societal implications
  • Feb 12 - Oral presentations of individual literature research
  • Feb 14 - Oral presentations of individual literature research

Module 2 - Engineered biological systems

  • Feb 19 - Synthetic genes, biological machines, and minimal genomes
  • Feb 21 - Case studies in synthetic biology
  • Feb 26 - Genetic circuit engineering
  • Feb 28 - Genetic circuit engineering
  • Mar 04 - Spring break
  • Mar 06 - Spring break
  • Mar 11 - Metabolic pathway engineering
  • Mar 13 - Metabolic pathway engineering
  • Mar 18 - Biological network engineering
  • Mar 20 - Oral presentations of individual part design
  • Mar 25 - Oral presentations of individual part design

Module 3 - Systems biology and modeling

  • Mar 27 - Systems biology and the 'omic sciences
  • Apr 01 - Mathematical biology
  • Apr 03 - Computational biology
  • Apr 08 - Metabolic flux analysis
  • Apr 10 - Genome-scale metabolic models
  • Apr 15 - Modeling genetic regulatory networks
  • Apr 17 - Systems biotechnology
  • Apr 22 - Oral presentations of group system design
  • Apr 24 - Oral presentations of group system design
  • Apr 29 - Review of course