Difference between revisions of "Brown BIOL1220:Notebook/SynBio in Theory and Practice"

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==Project Description/Abstract==
 
==Project Description/Abstract==
 
* Place short description of project or notes regarding this project
 
* Place short description of project or notes regarding this project
 +
* The new positive control for PCR is in the freezer, in an orange-top 15ml tube. It has two primers (F and R, use 1ul each) and the template DNA (a plasmid for the primers, and amplifies a ~3 kb piece - hint, how does this influence your PCR machine programming conditions?)
  
 
==People==
 
==People==
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* Kate
 
* Kate
 
* Rima
 
* Rima
 +
*[[User: Neil_J._Parikh|Neil]]
 +
 
===Students===
 
===Students===
Meleha, [[User:William_E._Allen|Will]], Stephanie, John, War War, Annie Rose, Margaret, Abe, Ahmad, Indu, Katrina, Eli
+
[[User: Meleha_Ahmad|Meleha]], [[User:William_E._Allen|Will]], [[User: Stephanie_Cheung|Steph]], [[User: John_Flintermann|John]], [[User: Flora_Ko|Flora]], [[User:Annie_Rose_London|Annie Rose]], Margaret, [[User: Abe_Pressman|Abe]], [[User: Ahmad_B._Rana|Ahmad]], [[User: Indu_Voruganti|Indu]], [[User:Katrina_Wilson|Katrina]], [[User:Elias_Scheer|Eli]], [[User: Minoo_Ramanathan|Minoo]], [[User:Michael_T._Chang|Michael]], Ashley, Hari
 +
 
 +
*[[/General Lab Information/|*Student Numbering*]]
  
 
==Notebooks==
 
==Notebooks==
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*[[/Genes/|Genes]]
 
*[[/Genes/|Genes]]
 
*[[/BacterialTransformation/|Bacterial Transformation]]
 
*[[/BacterialTransformation/|Bacterial Transformation]]
 +
*[[/Bacterial Basics/|General Information about Bacteria]]
 +
*[[/Mechanism of antibiotics/|Mechanism of antibiotics]]
 +
*[[/PCR Reactions/|PCR March 18 2009]]
  
 
==Useful Links==
 
==Useful Links==
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==Notes==
 
==Notes==
 +
*[[How to Gain Card Access to the BioMed Center]]
 
* Place some notes here for visitors
 
* Place some notes here for visitors
  
* Example: This project is currently on hold until further notice.
+
* Example: This project is currently on hold until further notice
 
 
  
 
|-
 
|-

Revision as of 09:48, 20 March 2009

<!-- sibboleth --><div id="lncal1" style="border:0px;"><div style="display:none;" id="id">lncal1</div><div style="display:none;" id="dtext">02/11/2009,02/20/2009</div><div style="display:none;" id="page">Brown BIOL1220:Notebook/SynBio in Theory and Practice</div><div style="display:none;" id="fmt">yyyy/MM/dd</div><div style="display:none;" id="css">OWWNB</div><div style="display:none;" id="month"></div><div style="display:none;" id="year"></div><div style="display:none;" id="readonly">Y</div></div>

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Project Description/Abstract

  • Place short description of project or notes regarding this project
  • The new positive control for PCR is in the freezer, in an orange-top 15ml tube. It has two primers (F and R, use 1ul each) and the template DNA (a plasmid for the primers, and amplifies a ~3 kb piece - hint, how does this influence your PCR machine programming conditions?)

People

Instructor

TAs

Students

Meleha, Will, Steph, John, Flora, Annie Rose, Margaret, Abe, Ahmad, Indu, Katrina, Eli, Minoo, Michael, Ashley, Hari

Notebooks

Useful Links

Notes

  • Example: This project is currently on hold until further notice
Recent changes

26 September 2017

     07:32 

Tomlinson:News‎‎ (2 changes | history) . . (+83). . [Ryan E. Tomlinson‎ (2×)]

     

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(cur | prev) . . (+11). . Ryan E. Tomlinson (talk | contribs) (2017)

     

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(cur | prev) . . (+72). . Ryan E. Tomlinson (talk | contribs)

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Tomlinson:Lab Members‎‎ (3 changes | history) . . (+46). . [Ryan E. Tomlinson‎ (3×)]

     

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(cur | prev) . . (+4). . Ryan E. Tomlinson (talk | contribs) (Kimberly Huang)

     

07:30

(cur | prev) . . (+4). . Ryan E. Tomlinson (talk | contribs) (Emily Rumpf)

     

07:30

(cur | prev) . . (+38). . Ryan E. Tomlinson (talk | contribs)

     07:11 (Move log) . . Karmella Haynes (talk | contribs) moved page BME100 f2017:Group6 W1030 L6 to BME100 f2017:Group6 W1030 L6 delete this page(Class assignment. Students did not follow instructions for generating a page with correct formatting. Freeing up the page title to allow students to re-generate the correct page.)
     07:07  BME100 f2017:Projects6‎ (diff | hist) . . (+19). . Karmella Haynes (talk | contribs)
     07:07  BME100 f2017:Projects5‎ (diff | hist) . . (+19). . Karmella Haynes (talk | contribs)
     07:07  BME100 f2017:Projects4‎ (diff | hist) . . (+19). . Karmella Haynes (talk | contribs)
     07:01  BME100 f2017:Projects3‎ (diff | hist) . . (+19). . Karmella Haynes (talk | contribs)
     06:59  BME100 f2017:Projects2‎ (diff | hist) . . (+19). . Karmella Haynes (talk | contribs)

     04:06 

Butlin:Unix for Bioinformatics - advanced tutorial‎‎ (3 changes | history) . . (+334). . [Claudius E Kerth‎ (3×)]

     

04:06

(cur | prev) . . (+148). . Claudius E Kerth (talk | contribs) (Added troublehooting tip: when rename.pl download link does not work, go to my Dropbox)

     

02:44

(cur | prev) . . (+168). . Claudius E Kerth (talk | contribs) (added Troubleshooting tip)

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02:36

(cur | prev) . . (+18). . Claudius E Kerth (talk | contribs) (TASK 5: I have split my reads by barcode and I have quality filtered them. Now I want to know how many reads I have left from each (barcoded) individual. How can I find that out?)

25 September 2017

     21:19 

BME100 f2017:Group12 W0800 L3‎‎ (12 changes | history) . . (+3,361). . [Priscilla Y. Han‎ (12×)]

     

21:19

(cur | prev) . . (+25). . Priscilla Y. Han (talk | contribs) (Descriptive Stats and Graph)

     

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(cur | prev) . . (+70). . Priscilla Y. Han (talk | contribs) (Descriptive Stats and Graph)

     

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(cur | prev) . . (-3). . Priscilla Y. Han (talk | contribs) (Experimental Design of Device)

     

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(cur | prev) . . (-12). . Priscilla Y. Han (talk | contribs) (Experimental Design of Device)

     

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(cur | prev) . . (+15). . Priscilla Y. Han (talk | contribs) (Experimental Design of Device)

     

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(cur | prev) . . (+3,181). . Priscilla Y. Han (talk | contribs) (Experimental Design of Device)

     

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(cur | prev) . . (+5). . Priscilla Y. Han (talk | contribs) (Descriptive Stats and Graph)

     

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(cur | prev) . . (+25). . Priscilla Y. Han (talk | contribs) (Descriptive Stats and Graph)

     

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(cur | prev) . . (+2). . Priscilla Y. Han (talk | contribs) (Descriptive Stats and Graph)

     

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(cur | prev) . . (+29). . Priscilla Y. Han (talk | contribs) (Descriptive Stats and Graph)

     

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(cur | prev) . . (-3). . Priscilla Y. Han (talk | contribs) (Descriptive Stats and Graph)

     

20:55

(cur | prev) . . (+27). . Priscilla Y. Han (talk | contribs) (Descriptive Stats and Graph)

     21:19 

(Upload log). .

[Priscilla Y. Han‎ (7×)]

     

21:19

. . Priscilla Y. Han (talk | contribs) uploaded File:Pulsingbargraph12.png

     

21:18

. . Priscilla Y. Han (talk | contribs) uploaded File:Mypear sonheart12.png

     

21:18

. . Priscilla Y. Han (talk | contribs) uploaded File:Heartratespree12.png

     

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. . Priscilla Y. Han (talk | contribs) uploaded File:Scrnshotspree12.png

     

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. . Priscilla Y. Han (talk | contribs) uploaded File:2columnbarsspree.png

     

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. . Priscilla Y. Han (talk | contribs) uploaded a new version of File:Mypear sonr.png

     

20:56

. . Priscilla Y. Han (talk | contribs) uploaded File:Mypear sonr.png

     20:33 

BME100 f2017:Group8 W1030 L3‎‎ (9 changes | history) . . (+501). . [Jennifer L. Brodsky‎ (9×)]

     

20:33

(cur | prev) . . (+5). . Jennifer L. Brodsky (talk | contribs) (Experimental Design of Own Device)

     

20:32

(cur | prev) . . (+112). . Jennifer L. Brodsky (talk | contribs) (Experimental Design of Own Device)

     

20:29

(cur | prev) . . (0). . Jennifer L. Brodsky (talk | contribs) (Experimental Design of Own Device)

     

20:28

(cur | prev) . . (+13). . Jennifer L. Brodsky (talk | contribs) (Experimental Design of Own Device)

     

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(cur | prev) . . (-1). . Jennifer L. Brodsky (talk | contribs) (Experimental Design of Own Device)

     

20:26

(cur | prev) . . (+1). . Jennifer L. Brodsky (talk | contribs) (Experimental Design of Own Device)

     

20:26

(cur | prev) . . (+177). . Jennifer L. Brodsky (talk | contribs) (Experimental Design of Own Device)

     

20:25

(cur | prev) . . (+7). . Jennifer L. Brodsky (talk | contribs) (Experimental Design of Own Device)

     

20:24

(cur | prev) . . (+187). . Jennifer L. Brodsky (talk | contribs) (Experimental Design of Own Device)

N    20:17  BME100 f2017:Group10 W0800 L3‎ (diff | hist) . . (+767). . Whitney Hirano (talk | contribs) (Created page with "5. The mean value of heart rate calculated from the pulse ox was 98.3673 beats/min with a standard deviation of 22.2273, while the mean value of heart rate calculated from the...")
     19:56  BME100 f2017:Group9 W0800 L3‎ (diff | hist) . . (+3). . Irene Zhang (talk | contribs) (LAB 3 WRITE-UP)

     19:52 

BME100 f2017:Projects1‎‎ (3 changes | history) . . (+19). . [Yar‎; Karmella Haynes‎ (2×)]

     

19:52

(cur | prev) . . (0). . Yar (talk | contribs) (small change to force cache purge)

     

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(cur | prev) . . (+21). . Karmella Haynes (talk | contribs)

     

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(cur | prev) . . (-2). . Karmella Haynes (talk | contribs) (Lab 1: “Needs Identification”)

     19:19  CONJ606:Schedule‎ (diff | hist) . . (+23). . Maureen E. Hoatlin (talk | contribs) (Week-by-Week Schedule Summary)

     19:06 

BME100 f2017‎‎ (2 changes | history) . . (+1). . [Karmella Haynes‎ (2×)]

     

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(cur | prev) . . (-8). . Karmella Haynes (talk | contribs)

     

19:06

(cur | prev) . . (+9). . Karmella Haynes (talk | contribs)