# Difference between revisions of "Biomod/2013/NanoUANL/Reactor"

(New page: == What is a reactor? == === Introduction === The CCMV capsid was considered as a continuous stirred-tank reactor with accumulation of the product. For an enzymatic reaction of the ty...) |
|||

Line 1: | Line 1: | ||

− | |||

== What is a reactor? == | == What is a reactor? == | ||

Line 23: | Line 22: | ||

Mass balance was presented as such: | Mass balance was presented as such: | ||

− | + | '''INTAKE= OUTFLOW- DISAPPEARANCE BY REACTION + ACCUMULATION | |

+ | ''' | ||

where | where | ||

− | + | Intake= F<sub>0</sub> | |

− | + | ||

+ | Outflow= F<sub>0</sub>(1-X<sub>S</sub>) | ||

+ | |||

Disappearance = V(-r<sub>S</sub> | Disappearance = V(-r<sub>S</sub> | ||

+ | |||

Accumulation = <math>\tfrac{d[P]}{dt}</math> | Accumulation = <math>\tfrac{d[P]}{dt}</math> | ||

+ | |||

+ | F<sub>0</sub> = F<sub>0</sub>(1-X<sub>S</sub>) - V(-r<sub>S</sub>) + <math>\tfrac{d[P]}{dt}</math> | ||

+ | |||

+ | The intake and outflow flux were determined by diffusion , considering a spherical container. | ||

+ | |||

+ | [[Image:CCMV2.jpg]] | ||

+ | |||

+ | For the simplification of the diffusion phenomenon we considered: | ||

+ | |||

+ | *Constant temperature | ||

+ | *Constant pressure | ||

+ | *Species B stays in a stationary state (it does not diffuse in A) | ||

+ | *The container (VLP) has a spherical shape | ||

+ | |||

+ | A mass balance, taking into account a spherical envelope leads to: | ||

+ | |||

+ | <math>\frac{d}{dr}(r^2N_{Ar})=0</math> | ||

+ | |||

+ | where N<sub>Ar</sub> represents molar flux. For N<sub>Br</sub> we obtain: | ||

+ | |||

+ | <math>\frac{d}{dr}(r^2\frac{cD_{AB}}{1-x_A}\frac{dx_A}{dr})=0</math> | ||

+ | |||

+ | At a constant temperature the product (cD<sub>AB</sub>) is equally constant and x<sub>A</sub>=1-x<sub>B</sub>, the equation can be integrated into the following expression: | ||

+ | |||

+ | <math>F_A=4\pi r_1^2N_{Ar}|_{r=r1}= | ||

+ | \frac{4\pi cD_{AB}}{1/r_1=1/r_2} | ||

+ | \ln\frac{x_{B2}}{x_{B1}} | ||

+ | |||

+ | </math> |

## Revision as of 21:45, 11 October 2013

## What is a reactor?

### Introduction

The CCMV capsid was considered as a continuous stirred-tank reactor with accumulation of the product.

For an enzymatic reaction of the type:

**Failed to parse (MathML with SVG or PNG fallback (recommended for modern browsers and accessibility tools): Invalid response ("Math extension cannot connect to Restbase.") from server "https://api.formulasearchengine.com/v1/":): {\displaystyle E + S \leftrightarrow ES \rightarrow E^0 + P}**

with a reaction rate of:

**Failed to parse (MathML with SVG or PNG fallback (recommended for modern browsers and accessibility tools): Invalid response ("Math extension cannot connect to Restbase.") from server "https://api.formulasearchengine.com/v1/":): {\displaystyle \frac{d[ES]}{dt}=k_1[E][S]-k_{-1}[ES]-k_2[ES]}**

We established the following in our system:

- Uniform distribution throughout the reactor
- K
_{-1}>> K_{1}and K_{2} - One enzyme per reactor/VLP
- Tortuosity approaches zero during diffusion

Mass balance was presented as such:

**INTAKE= OUTFLOW- DISAPPEARANCE BY REACTION + ACCUMULATION**

where

Intake= F_{0}

Outflow= F_{0}(1-X_{S})

Disappearance = V(-r_{S}

Accumulation = **Failed to parse (MathML with SVG or PNG fallback (recommended for modern browsers and accessibility tools): Invalid response ("Math extension cannot connect to Restbase.") from server "https://api.formulasearchengine.com/v1/":): {\displaystyle \tfrac{d[P]}{dt}}**

F_{0} = F_{0}(1-X_{S}) - V(-r_{S}) + **Failed to parse (MathML with SVG or PNG fallback (recommended for modern browsers and accessibility tools): Invalid response ("Math extension cannot connect to Restbase.") from server "https://api.formulasearchengine.com/v1/":): {\displaystyle \tfrac{d[P]}{dt}}**

The intake and outflow flux were determined by diffusion , considering a spherical container.

For the simplification of the diffusion phenomenon we considered:

- Constant temperature
- Constant pressure
- Species B stays in a stationary state (it does not diffuse in A)
- The container (VLP) has a spherical shape

A mass balance, taking into account a spherical envelope leads to:

**Failed to parse (MathML with SVG or PNG fallback (recommended for modern browsers and accessibility tools): Invalid response ("Math extension cannot connect to Restbase.") from server "https://api.formulasearchengine.com/v1/":): {\displaystyle \frac{d}{dr}(r^2N_{Ar})=0}**

where N_{Ar} represents molar flux. For N_{Br} we obtain:

**Failed to parse (MathML with SVG or PNG fallback (recommended for modern browsers and accessibility tools): Invalid response ("Math extension cannot connect to Restbase.") from server "https://api.formulasearchengine.com/v1/":): {\displaystyle \frac{d}{dr}(r^2\frac{cD_{AB}}{1-x_A}\frac{dx_A}{dr})=0}**

At a constant temperature the product (cD_{AB}) is equally constant and x_{A}=1-x_{B}, the equation can be integrated into the following expression:

**Failed to parse (MathML with SVG or PNG fallback (recommended for modern browsers and accessibility tools): Invalid response ("Math extension cannot connect to Restbase.") from server "https://api.formulasearchengine.com/v1/":): {\displaystyle F_A=4\pi r_1^2N_{Ar}|_{r=r1}= \frac{4\pi cD_{AB}}{1/r_1=1/r_2} \ln\frac{x_{B2}}{x_{B1}} }**