Difference between revisions of "Bateman:LabStuff"

From OpenWetWare
Jump to: navigation, search
(Journal Club articles)
(Journal Club articles)
Line 32: Line 32:
== Journal Club articles ==
== Journal Club articles ==
[http://www.ncbi.nlm.nih.gov/pubmed/23665475 A temporal mechanism that produces neuronal diversity in the Drosophila visual center.
[http://www.ncbi.nlm.nih.gov/pubmed/23665475 A temporal mechanism that produces neuronal diversity in the Drosophila visual center.
Suzuki T, Kaido M, Takayama R, Sato M. Dev Biol. 2013 Aug 1;380(1):12-24]
Suzuki T, Kaido M, Takayama R, Sato M. Dev Biol. 2013 Aug 1;380(1):12-24]

Revision as of 02:27, 10 February 2014

Stuff banner.jpg

Home        Research        Lab Members        Publications        Links        Lab Stuff        Tools       


KCL purchasing


Media: Fly_stock_template.xls

Media: Antibody stocks template.xls

Media: Bacterial stocks template.xls

Media: Plasmids template.xls

Media: Vector_data_sheet.doc

Media: Imaging_files_database_template.xls

Journal Club articles


[http://www.ncbi.nlm.nih.gov/pubmed/23665475 A temporal mechanism that produces neuronal diversity in the Drosophila visual center. Suzuki T, Kaido M, Takayama R, Sato M. Dev Biol. 2013 Aug 1;380(1):12-24]


mTORC1 Controls Mitochondrial Activity and Biogenesis through 4E-BP-Dependent Translational Regulation. Morita M, Gravel SP, Chénard V, Sikström K, Zheng L, Alain T, Gandin V, Avizonis D, Arguello M, Zakaria C, McLaughlan S, Nouet Y, Pause A, Pollak M, Gottlieb E, Larsson O, St-Pierre J, Topisirovic I, Sonenberg N. Cell Metab. 2013 Nov 5;18(5):698-711

midlife crisis encodes a conserved zinc-finger protein required to maintain neuronal differentiation in Drosophila. Carney TD, Struck AJ, Doe CQ. Development. 2013 Oct;140(20):4155-64

Bigenomic transcriptional regulation of all thirteen cytochrome c oxidase subunit genes by specificity protein 1. Dhar SS, Johar K, Wong-Riley MT. Open Biol. 2013 Mar 20;3(3):120176

The PINK1-Parkin pathway promotes both mitophagy and selective respiratory chain turnover in vivo. Proc Natl Acad Sci U S A. 2013 Mar 18

A secreted decoy of InR antagonizes insulin/IGF signaling to restrict body growth in Drosophila. Okamoto N, Nakamori R, Murai T, Yamauchi Y, Masuda A, Nishimura T. Genes Dev. 2013 Jan 1;27(1):87-97. doi: 10.1101/gad.204479.112

Adenosine Nucleotide Biosynthesis and AMPK Regulate Adult Life Span and Mediate the Longevity Benefit of Caloric Restriction in Flies. Stenesen D, Suh JM, Seo J, Yu K, Lee KS, Kim JS, Min KJ, Graff JM. Cell Metab. 2013 Jan 8;17(1):101-12


Analysis of neural subtypes reveals selective mitochondrial dysfunction in dopaminergic neurons from parkin mutants. Burman JL, Yu S, Poole AC, Decal RB, Pallanck L. Proc Natl Acad Sci U S A. 2012 Jun 26;109(26):10438-43

Mitochondria-specific accumulation of amyloid β induces mitochondrial dysfunction leading to apoptotic cell death. Cha MY, Han SH, Son SM, Hong HS, Choi YJ, Byun J, Mook-Jung I. PLoS One. 2012;7(4):e34929

Modularity and hormone sensitivity of the Drosophila melanogaster insulin receptor/target of rapamycin interaction proteome. Glatter T, Schittenhelm RB, Rinner O, Roguska K, Wepf A, Jünger MA, Köhler K, Jevtov I, Choi H, Schmidt A, Nesvizhskii AI, Stocker H, Hafen E, Aebersold R, Gstaiger M. Mol Syst Biol. 2011 Nov 8;7:547. doi: 10.1038/msb.2011.79

Metabolic differentiation in the embryonic retina. Agathocleous M, Love NK, Randlett O, Harris JJ, Liu J, Murray AJ, Harris WA. Nat Cell Biol. 2012 Aug;14(8):859-64

Mitochondrial dynamics and bioenergetic dysfunction is associated with synaptic alterations in mutant SOD1 motor neurons. Magrané J, Sahawneh MA, Przedborski S, Estévez ÁG, Manfredi G. J Neurosci. 2012 Jan 4;32(1):229-42

Insulin receptor-mediated signaling via phospholipase C-γ regulates growth and differentiation in Drosophila. Murillo-Maldonado JM, Zeineddine FB, Stock R, Thackeray J, Riesgo-Escovar JR. PLoS One. 2011;6(11):e28067

The Yeast Complex I Equivalent NADH Dehydrogenase Rescues pink1 Mutants.Vilain S, Esposito G, Haddad D, Schaap O, Dobreva MP, Vos M, Van Meensel S, Morais VA, De Strooper B, Verstreken P.PLoS Genet. 2012 Jan;8(1):e1002456.


Regulation of Drosophila glial cell proliferation by Merlin-Hippo signaling. B. V. V. G. Reddy and Kenneth D. Irvine Development. 2011 Dec;138(23):5201-12.

PINK1 and Parkin Target Miro for Phosphorylation and Degradation to Arrest Mitochondrial Motility Xinnan Wang1, 3, Dominic Winter2, Ghazaleh Ashrafi1, 4, Julia Schlehe5, Yao Liang Wong6, Dennis Selkoe5, Sarah Rice6, Judith Steen1, 2, Matthew J. LaVoie5, Thomas L. Schwarz. Cell Volume 147, Issue 4, 11 November 2011, Pages 893–906

Glia and muscle sculpt neuromuscular arbors by engulfing destabilized synaptic boutons and shed presynaptic debris. Fuentes-Medel Y, Logan MA, Ashley J, Ataman B, Budnik V, Freeman MR. PLoS Biol. 2009 Aug;7(8):e1000184

During autophagy mitochondria elongate, are spared from degradation and sustain cell viability. Gomes LC, Di Benedetto G, Scorrano L. Nat Cell Biol. 2011, 13 :589-98

Drosophila FMRP regulates microtubule network formation and axonal transport of mitochondria. Yao A, Jin S, Li X, Liu Z, Ma X, Tang J, Zhang YQ. Hum Mol Genet. 2011 Jan 1;20(1):51-63.

Nutrition-responsive glia control exit of neural stem cells from quiescence. Chell JM, Brand AH. Cell. 2010 Dec 23;143(7):1161-73.


Expression of the yeast NADH dehydrogenase Ndi1 in Drosophila confers increased lifespan independently of dietary restriction. Sanz A, Soikkeli M, Portero-Otín M, Wilson A, Kemppainen E, McIlroy G, Ellilä S, Kemppainen KK, Tuomela T, Lakanmaa M, Kiviranta E, Stefanatos R, Dufour E, Hutz B, Naudí A, Jové M, Zeb A, Vartiainen S, Matsuno-Yagi A, Yagi T, Rustin P, Pamplona R, Jacobs HT. Proc Natl Acad Sci U S A. 2010 107:9105-9110

Initiation of neuronal differentiation requires PI3-kinase/TOR signalling in the vertebrate neural tube.Fishwick KJ, Li RA, Halley P, Deng P, Storey KG. Dev Biol. 2010 Feb 15;338(2):215-225.

Heteroplasmic mitochondrial DNA mutations in normal and tumour cells. He Y, Wu J, Dressman DC, Iacobuzio-Donahue C, Markowitz SD, Velculescu VE, Diaz LA Jr, Kinzler KW, Vogelstein B, Papadopoulos N. Nature. 2010 Mar 25;464(7288):610-4.

Combined inactivation of pRB and hippo pathways induces dedifferentiation in the Drosophila retina.Nicolay BN, Bayarmagnai B, Moon NS, Benevolenskaya EV, Frolov MV. PLoS Genet. 2010 Apr 22;6(4):e1000918.

Rapamycin activation of 4E-BP prevents parkinsonian dopaminergic neuron loss. Tain LS, Mortiboys H, Tao RN, Ziviani E, Bandmann O, Whitworth AJ. Nat Neurosci. 2009 Sep;12(9):1129-35

FOXO-regulated transcription restricts overgrowth of Tsc mutant organs. J Cell Biol. 2008 Feb 25;180(4):691-6


Reiterative use of the EGF receptor triggers differentiation of all cell types in the Drosophila eye.Freeman M.Cell. 1996 Nov 15;87(4):651-60

TSC1 and TSC2 tumor suppressors antagonize insulin signaling in cell growth.Gao X, Pan D. Genes Dev. 2001 Jun 1;15(11):1383-92

Neuronal programmed cell death induces glial cell division in the adult Drosophila brain. Kato K, Awasaki T, Ito K. Development. 2009 Jan;136(1):51-9. Epub 2008 Nov 19