BIOL398-03/S13:Week 14: Difference between revisions

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* Add the "BIOL398-03/S13" category to the end of the wiki page (if someone has not already done so).
* Add the "BIOL398-03/S13" category to the end of the wiki page (if someone has not already done so).


<!--=== Reflection ===
=== Reflection ===


Look over the excel workbook input file.
Reflect back on your learning for this project and for the entire semester and answer the following:
* How might you change the network to add more genes/transcription factors?
 
* How might you run a computer experiment to examine the deletion of a gene?
# What is the value of combining biological and mathematical approaches to scientific questions?
Return to the chemostat.
# Looking back on your reflections on the Janovy and Steward readings from the [[BIOL398-03/S13:Class Journal Week 1 | Week 1 Class Journal]], do you have any further insights to share? Have your answers changed to those original reflection questions?  Why or why not?
* In concept, without worrying about creating matlab code, how might you use the least squares technique to get parameters from the ter Schure et al experiments?
Read over the Vu and Vhoradsky paper in this week's reading list.
* Is the method of the paper different from that in class?  If so, in what ways?-->

Revision as of 19:17, 22 April 2013

BIOL398-03: Biomathematical Modeling

MATH 388-01: Survey of Biomathematics

Loyola Marymount University

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This journal entry is due on Friday, April 26 at midnight PDT (Thursday night/Friday morning). NOTE that the server records the time as Eastern Daylight Time (EDT). Therefore, midnight will register as 03:00.

Individual Journal Assignment

  • Store this journal entry as "username Week 14" (i.e., this is the text to place between the square brackets when you link to this page).
  • Create the following set of links. (HINT: you can do all of this easily by adding them to your template and then using the template on your pages.)
    • Link to your journal entry from your user page.
    • Link back from your journal entry to your user page.
    • Link to this assignment from your journal entry.
    • Don't forget to add the "BIOL398-03/S13" category to the end of your wiki page.

Tasks

Degradation rates for transcription factors from Belle et. all (2006).

Shared Journal Assignment

  • Store your journal entry in the shared Class Journal Week 14 page. If this page does not exist yet, go ahead and create it (congratulations on getting in first :) )
  • Link to your journal entry from your user page.
  • Link back from the journal entry to your user page.
  • Sign your portion of the journal with the standard wiki signature shortcut (~~~~).
  • Add the "BIOL398-03/S13" category to the end of the wiki page (if someone has not already done so).

Reflection

Reflect back on your learning for this project and for the entire semester and answer the following:

  1. What is the value of combining biological and mathematical approaches to scientific questions?
  2. Looking back on your reflections on the Janovy and Steward readings from the Week 1 Class Journal, do you have any further insights to share? Have your answers changed to those original reflection questions? Why or why not?
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