Artificial transcriptional terminators

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References

  1. d'Aubenton Carafa Y, Brody E, and Thermes C. Prediction of rho-independent Escherichia coli transcription terminators. A statistical analysis of their RNA stem-loop structures. J Mol Biol. 1990 Dec 20;216(4):835-58. PubMed ID:1702475 | HubMed [Aubenton90]
  2. Brendel V, Hamm GH, and Trifonov EN. Terminators of transcription with RNA polymerase from Escherichia coli: what they look like and how to find them. J Biomol Struct Dyn. 1986 Feb;3(4):705-23. DOI:10.1080/07391102.1986.10508457 | PubMed ID:3078109 | HubMed [Bredel86]
  3. Cheng SW, Lynch EC, Leason KR, Court DL, Shapiro BA, and Friedman DI. Functional importance of sequence in the stem-loop of a transcription terminator. Science. 1991 Nov 22;254(5035):1205-7. PubMed ID:1835546 | HubMed [Cheng91]
  4. Christie GE, Farnham PJ, and Platt T. Synthetic sites for transcription termination and a functional comparison with tryptophan operon termination sites in vitro. Proc Natl Acad Sci U S A. 1981 Jul;78(7):4180-4. PubMed ID:7027254 | HubMed [Christie81]
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  7. Lynn SP, Kasper LM, and Gardner JF. Contributions of RNA secondary structure and length of the thymidine tract to transcription termination at the thr operon attenuator. J Biol Chem. 1988 Jan 5;263(1):472-9. PubMed ID:2961747 | HubMed [Lynn88]
  8. Petrillo M, Silvestro G, Di Nocera PP, Boccia A, and Paolella G. Stem-loop structures in prokaryotic genomes. BMC Genomics. 2006 Jul 4;7:170. DOI:10.1186/1471-2164-7-170 | PubMed ID:16820051 | HubMed [Petrillo06]
  9. Reynolds R, Bermúdez-Cruz RM, and Chamberlin MJ. Parameters affecting transcription termination by Escherichia coli RNA polymerase. I. Analysis of 13 rho-independent terminators. J Mol Biol. 1992 Mar 5;224(1):31-51. PubMed ID:1372365 | HubMed [Reynolds92I]
  10. Reynolds R and Chamberlin MJ. Parameters affecting transcription termination by Escherichia coli RNA. II. Construction and analysis of hybrid terminators. J Mol Biol. 1992 Mar 5;224(1):53-63. PubMed ID:1372366 | HubMed [Reynolds92II]
  11. Unniraman S, Prakash R, and Nagaraja V. Conserved economics of transcription termination in eubacteria. Nucleic Acids Res. 2002 Feb 1;30(3):675-84. PubMed ID:11809879 | HubMed [Unniraman02]
  12. Uptain SM and Chamberlin MJ. Escherichia coli RNA polymerase terminates transcription efficiently at rho-independent terminators on single-stranded DNA templates. Proc Natl Acad Sci U S A. 1997 Dec 9;94(25):13548-53. PubMed ID:9391063 | HubMed [Uptain97]
  13. von Hippel PH and Yager TD. The elongation-termination decision in transcription. Science. 1992 Feb 14;255(5046):809-12. PubMed ID:1536005 | HubMed [VonHippel92]
  14. Wilson KS and von Hippel PH. Stability of Escherichia coli transcription complexes near an intrinsic terminator. J Mol Biol. 1994 Nov 18;244(1):36-51. DOI:10.1006/jmbi.1994.1702 | PubMed ID:7966320 | HubMed [Wilson94]
  15. Wilson KS and von Hippel PH. Transcription termination at intrinsic terminators: the role of the RNA hairpin. Proc Natl Acad Sci U S A. 1995 Sep 12;92(19):8793-7. PubMed ID:7568019 | HubMed [Wilson95]
  16. Yager TD and von Hippel PH. A thermodynamic analysis of RNA transcript elongation and termination in Escherichia coli. Biochemistry. 1991 Jan 29;30(4):1097-118. PubMed ID:1703438 | HubMed [Yager91]
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