20.181:Assignments: Difference between revisions
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#*[[Media:Data7.txt | Example data]] | #*[[Media:Data7.txt | Example data]] | ||
#*[[Media:Vector.txt | Python module for vector math]] | #*[[Media:Vector.txt | Python module for vector math]] | ||
#[[Media:20.181.hw8.pdf | Assignment # | #[[Media:20.181.hw8.pdf | Assignment #8 PDF]] due before Nov. 7 | ||
#*[[Media:hw8.zip | Code and data for hw8]] | #*[[Media:hw8.zip | Code and data for hw8]] | ||
==Metabolic Networks== | ==Metabolic Networks== | ||
Revision as of 12:36, 31 October 2006
Phylogenetic Inference
- Assignment #1 PDF due before Sept. 14 (due on Wednesday before midnight)
- Assignment #2 PDF due before Sept. 19
- hw2.py: codebase for assignment #2 (run with "python hw2.py")
- Example tree
- a solution
- Assignment #3 PDF due before Sept. 21,
- Hw3.py: codebase for assignment #3 run with "python hw3.py",
- Example tree in Newick form
- pdf of example tree
- smaller test tree (with answers)
- a solution
- Assignment #4 PDF due before Sept. 28
- Assignment #5 PDF due before Oct. 10
- hw5.py codebase for hw5 updated! -Sonia 19:58, 5 October 2006 (EDT)
- Example tree
- Example sequence alignment
- jukes-cantor placeholding code
- a solution
- a derivation
Molecular Modeling
- Assignment #6 PDF due before Oct. 17
- Assignment #7 PDF due before Oct. 27
- Assignment #8 PDF due before Nov. 7
