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=='''Graded Lab Assignments'''==
=='''Graded Lab Assignments'''==
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! 8
! 8
| '''9'''
| '''9'''
| '''Make a table of the tests performed on the isolates from your soil community''' (your isolates and your teammates from the same sampling site) and write a results narrative for it. You should include in the table: Gram stain, description of the colony morphology, description of the individual bacteria and any characteristic arrangement (cocci, rods, with descriptors ie., large, small, bullet shaped, in chains, etc.), evidence of spores (either endospore stain positive or visualization of empty areas in vegetative cells on Gram stain), quorum sensing, antibiotic production, motility, indole, and H<sub>2</sub>S, nitrogen cycling results (maybe--if they worked). Make a separate figure from a photograph of your interactions assay and analyze those data. <BR>'''Graphical abstract''': See models in research reports found in recent issues of the journal ''Cell''. <BR> A description and examples of Graphical Abstracts can be found at http://www.elsevier.com/wps/find/authorsview.authors/graphicalabstracts [http://www.elsevier.com/wps/find/authorsview.authors/graphicalabstracts]. More information on this assignment found at: [[BISC209/S11: Assignment_209_Lab9 | Assignment: Graphical Abstract/Discussion Info]]
| Study for your Lab Practical
| 5
|
|-
|-
! 9
! 9
| '''10'''
| '''9'''
| '''Study for Lab practical.'''Make trees from your phylogenetic relationships among your 16s rRNA identified and unindentified bacteria. Complete your graphical abstract if you want to add a tree.
| '''Lab practical'''  
|  
| 45
|-
|-
|-
! 10
! 9
| '''10'''
| '''10'''
| '''Lab practical'''  
| '''Make a table of the tests performed on the isolates from your soil community''' (your isolates and your teammates from the same sampling site) and write a results narrative for it. You should include in the table: Gram stain, description of the colony morphology, description of the individual bacteria and any characteristic arrangement (cocci, rods, with descriptors ie., large, small, bullet shaped, in chains, etc.), evidence of spores (either endospore stain positive or visualization of empty areas in vegetative cells on Gram stain), quorum sensing, antibiotic production, motility, indole, and H<sub>2</sub>S, nitrogen cycling results (maybe--if they worked). Make a separate figure from a photograph of your interactions assay and analyze those data. <BR>'''Graphical abstract''': See models in research reports found in recent issues of the journal ''Cell''. <BR> A description and examples of Graphical Abstracts can be found at http://www.elsevier.com/wps/find/authorsview.authors/graphicalabstracts [http://www.elsevier.com/wps/find/authorsview.authors/graphicalabstracts]. More information on this assignment found at: [[BISC209/S11: Assignment_209_Lab9 | Assignment: Graphical Abstract/Discussion Info]]
| 45
| 5
|-
|-
! 10
! 10
| '''11'''
| '''11'''
|  
| Prepare & Bring draft table/figures, including a phylogetic tree, from the 16s rDNA sequencing analysis in RDP.
| 25
|
|-
! 11
| '''12'''
| '''Lab notebook'''
| 5
|-
|-
!  
!
| '''April 24<BR>or 25'''
| '''April 24<BR>or 25'''
|'''Final Paper due by 4pm to your dropbox in Sakai & hard copy to instructor's office
|'''Final Paper due by 4pm''' to your dropbox in Sakai & hard copy to instructor's office
|60
|-
|-
! 12
! 11
| '''12'''
| '''12'''
|'''Group Oral Presentation'''<BR> Note that the 15pt group total includes points for Individual Contribution to Group points--assigned by consensus of your project and presentation group
|'''Group Oral Presentation (15pt)'''<BR> Note that the 25pt group total includes points for Individual Contribution to Group points--assigned by consensus of your project and presentation group;<BR> '''Lab notebook due (5 pt)'''
| 15
| 30
|-
|-
! Other
! Other
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Lab 6 Assignment:  [[BISC209/S11: Assignment_209_Lab6 | Assignment: Theory Summary ]]<BR>
Lab 6 Assignment:  [[BISC209/S11: Assignment_209_Lab6 | Assignment: Theory Summary ]]<BR>
Lab 7 Assignment: [[BISC209/S11: Assignment_209_Lab7 | Assignment: Partial Results section with Fig/Tables]]<BR>
Lab 7 Assignment: [[BISC209/S11: Assignment_209_Lab7 | Assignment: Partial Results section with Fig/Tables]]<BR>
Lab 19 Assignment: [[BISC209/S11: Assignment_209_Lab9 | Assignment: Graphical Abstract]]<br>
Lab 9 Assignment: [[BISC209/S11: Assignment_209_Lab9 | Assignment: Graphical Abstract]]<br>
Lab 12 Assignment: [[BISC209/S11: Assignment_209_Lab12 | Assignment: Final Paper]]<br>
Lab 12 Assignment: [[BISC209/S11: Assignment_209_Lab12 | Assignment: Final Paper]]<br>


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