MurrayRM:Software notes: Difference between revisions
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New page: This page has some notes on different software packages that I am looking using or considering using. Mainly just a place to collect information and links for me and my collaborators. __N... |
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=== Flow cytometry (FCM) === | === Flow cytometry (FCM) === | ||
* FlowJo | * FlowJo - FlowJo is a commercial program for reading and displaying FCM data. | ||
* Weasel - Weasel is an open source tool for reading and displaying FCM data. | |||
* Bioconductor/flow (R) - Bioconductor is a suite of software tools for working with bioinformatics data. The flow package is a set of tools that are designed to read, process and view FCM data. The iFlow package provides a GUI style interface to data that is intended for exploration. | * Bioconductor/flow (R) - Bioconductor is a suite of software tools for working with bioinformatics data. The flow package is a set of tools that are designed to read, process and view FCM data. The iFlow package provides a GUI style interface to data that is intended for exploration. | ||
== Synthetic biology software == | == Synthetic biology software == | ||
Revision as of 18:29, 6 March 2010
This page has some notes on different software packages that I am looking using or considering using. Mainly just a place to collect information and links for me and my collaborators.
General purpose software
Mathematical analysis
- MATLAB
- SciPy
- R
Systems biology software
Modeling and analysis
- CellDesigner
- COPASI
- Simulac
- StochKit
Flow cytometry (FCM)
- FlowJo - FlowJo is a commercial program for reading and displaying FCM data.
- Weasel - Weasel is an open source tool for reading and displaying FCM data.
- Bioconductor/flow (R) - Bioconductor is a suite of software tools for working with bioinformatics data. The flow package is a set of tools that are designed to read, process and view FCM data. The iFlow package provides a GUI style interface to data that is intended for exploration.
