Ty Thomson: Difference between revisions

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==Personal==
==Personal==
===Bio===
===Bio===
Born in Toronto in 1979.  Grew up there, and attended the [http://www.utoronto.ca University of Toronto] (UofT, not to be confused with UT, which is some school in texas I hear).  Graduated in 2002 with a BASc (BASc = bachelor of applied science = canadian engineering degree) in Biomedical Engineering from the [http://www.engsci.utoronto.ca/ Engineering Science] program.  For 3 summers in undergrad I worked for MDS Proteomics (which changed names to Protana Inc, and was bought out by [http://www.transitiontherapeutics.com/ Transition Therapeutics]). I started grad school at [http://web.mit.edu/ MIT] in [http://web.mit.edu/be Biological Engineering] (BE) in the fall of 2002.  In January of 2003 I joined [[Drew Endy]]'s lab.  I mainly joined his lab cause he seemed to be the craziest and most outside-of-the-box faculty member in BE.  I have been loosely involved in the synthetic biology community here (although my research is not really synth bio), including the sythetic biology working group, and I helped organize [http://syntheticbiology.org/Synthetic_Biology_1.0.html Synthetic Biology 1.0].  I am somehow on the OWW steering committee, despite the fact that I rarely use OWW. I seem to be the skeptic/realist in the group, which is needed 'cause I work with a bunch of optimistic hippies.
Born in Toronto in 1979.  Grew up there, and attended the [http://www.utoronto.ca University of Toronto] (UofT, not to be confused with UT, which is some school in texas I hear).  Graduated in 2002 with a BASc (BASc = bachelor of applied science = canadian engineering degree) in Biomedical Engineering from the [http://www.engsci.utoronto.ca/ Engineering Science] program.  For 3 summers in undergrad I worked for MDS Proteomics (which changed names to Protana Inc, and was bought out by [http://www.transitiontherapeutics.com/ Transition Therapeutics]). I started grad school at [http://web.mit.edu/ MIT] in [http://web.mit.edu/be Biological Engineering] (BE) in the fall of 2002.  In January of 2003 I joined [[Drew Endy]]'s lab.  I mainly joined his lab cause he seemed to be the craziest and most outside-of-the-box faculty member in BE.  I was been loosely involved in the synthetic biology community there (although my research was not really synth bio related), including the sythetic biology working group, and I helped organize [http://syntheticbiology.org/Synthetic_Biology_1.0.html Synthetic Biology 1.0].  I'm now working at [http://plectix.com/ Plectix BioSystems] in Somerville MA, helping develop a cool  web-based platform for biological modeling called [http://www.cellucidate.com Cellucidate].
 
 
[[Image:Ty_and_beer.jpg|thumb|right|Ty on the Sam Adams brewery tour]]


===Hobbies===
===Hobbies===
*[http://en.wikipedia.org/wiki/Brewing Beer brewing]
*Beer brewing
*Snowboarding
*Snowboarding
...I must have other hobbies...  Am I really that lame?<p>
*Mountain biking
*Rollerblading
*Playing various team sports - hockey, football, softball (if that counts as a 'sport')
 
''Things I'm good at that aren't quite hobbies''
''Things I'm good at that aren't quite hobbies''
*Sleeping
*Sleeping  
*Washing dishes
*Washing dishes


===Contact===
===Contact===
'''Physical Address'''<br>
'''Email Address'''<br/>
31 Ames St.<br>
ty -dot- thomson -at- gmail -dot- com<br/>
68-570<br>
Cambridge, MA 02139<br>
'''Phone Number'''<br>
617.258.8684<br>
'''Virtual Address'''<br>
tmt -at- mit -dot- edu


==Science==
==Science==
===Interests===
===Interests===
*Modeling
*Computational modeling of signalling pathways
*Parameter sensitivity/identifiability
*Parameter sensitivity/identifiability
*Microfluidics
*Microfluidics
*Yeast pheromone response
*Yeast pheromone response


===[[TMT Thesis Project|Thesis Project]]===
===Thesis Project===
[http://www.yeastpheromonemodel.org/ YeastPheromoneModel.org]


===Publications===
===Blog===
*Stewart, I. I., Thomson, T., Figeys, D., and Duewel, H. S. (2003). "The Use of 18O Labeling as a Tool for Proteomic Applications", Handbook of Proteomic Methods, Edited by P. Michael Conn. Chapter 11, pages 145-179. (Totowa, New Jersey: Human Press Inc.)
[http://blog.plectix.com/ The Plectix Blog]
*Stewart, I. I., Thomson, T., and Figeys, D. (2001). 18O labeling: a tool for proteomics. Rapid Commun. Mass. Spectrom. 15, 2456-2465