Van Oudenaarden Lab:F29F11.5
Progress:
Probes designed: (03-01-2010 - Alexander van Oudenaarden)
Probes coupled:
Probes purified:
Probes tested:
Dyes available:
>F29F11.5a (ceh-22 spliced coding region)
atgttcaacgtgtcggcgctagcagcagcgacgccttctatcgcttcggtttcatccgttgcaagcccatcggagcaaca tggattgtctacaagtgttggcgtcggagtgaatgataccacttctcgaactggagatggcggcgccgcttcatcggctt caagtgcatcagcggcgccacaacagcagtcacaatcggcacttcataacaaactcgaagctaaatgggacactctactt cccaccgacaccaatttacaatgttccacgtggcctgatagcattccattacttgcaggatattctgctactcccacatt ttccttcgatccttgcacatacggcagctatgatccatctgcatattttgcttcaaacggaattgctggttccatgtaca ctctacctgatcaatttccacgttctgagaatgatatgctagataacagcaatacatcaaatggaaacaaaagcgataaa gatggaatcaaacttgaagatgaagatgaaattctggaagatgaagagaatgacgaagaagatgatggaactggaaaacg gaaaaagagaaagcgtcgcgttttgttcacaaaagcacaaacttatgaacttgaacgacgattccgctcgcaaaaatatc tgagcgcgcctgaacgtgaagctcttgcaatgcaaattcgacttactccgactcaagtaaaaatttggttccaaaatcat cgatacaaaacaaaaaaaagtcatacggataagccaataaacgcggcgcttcttaccacaatgcccaatgcattttcaag tcaatcgacagcggccagttttccaacaagagcaatgccgataccaatgctagtccgtgactcttctgctcgttcttcgg acatttcctcaacatctccatacacggtagcatttggaagtgccaattcaggatacctaccaacaccttccgcctacctc ccagccacttccgggtatttttcaaacggaccttcagcagcttcttcctacatgaccaatactcaatggtggccttcttg a
Name of probe set: ceh-22
Probes designed on Mon, 01 Mar 10 08:28:59 -0700
47 probes designed for target of length 1041 (target too short for 48 probes)
Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC
agcgccgacacgttgaacat, ceh-22_1, 1, 1, 55
gatagaaggcgtcgctgctg, ceh-22_2, 2, 23, 60
ttgcaacggatgaaaccgaa, ceh-22_3, 3, 45, 45
acaatccatgttgctccgat, ceh-22_4, 4, 69, 45
actccgacgccaacacttgt, ceh-22_5, 5, 91, 55
agttcgagaagtggtatcat, ceh-22_6, 6, 113, 40
atgaagcggcgccgccatct, ceh-22_7, 7, 135, 65
gccgctgatgcacttgaagc, ceh-22_8, 8, 157, 60
cgattgtgactgctgttgtg, ceh-22_9, 9, 179, 50
cttcgagtttgttatgaagt, ceh-22_10, 10, 201, 35
ggaagtagagtgtcccattt, ceh-22_11, 11, 223, 45
acattgtaaattggtgtcgg, ceh-22_12, 12, 245, 40
gaatgctatcaggccacgtg, ceh-22_13, 13, 267, 55
gcagaatatcctgcaagtaa, ceh-22_14, 14, 289, 40
atcgaaggaaaatgtgggag, ceh-22_15, 15, 311, 45
catagctgccgtatgtgcaa, ceh-22_16, 16, 333, 50
gaagcaaaatatgcagatgg, ceh-22_17, 17, 355, 40
catggaaccagcaattccgt, ceh-22_18, 18, 377, 50
gaaattgatcaggtagagtg, ceh-22_19, 19, 399, 40
agcatatcattctcagaacg, ceh-22_20, 20, 421, 40
catttgatgtattgctgtta, ceh-22_21, 21, 444, 30
ccatctttatcgcttttgtt, ceh-22_22, 22, 466, 35
atcttcatcttcaagtttga, ceh-22_23, 23, 488, 30
tctcttcatcttccagaatt, ceh-22_24, 24, 510, 35
gttccatcatcttcttcgtc, ceh-22_25, 25, 532, 45
ctttctctttttccgttttc, ceh-22_26, 26, 554, 35
cttttgtgaacaaaacgcga, ceh-22_27, 27, 576, 40
cgttcaagttcataagtttg, ceh-22_28, 28, 598, 35
atatttttgcgagcggaatc, ceh-22_29, 29, 620, 40
cttcacgttcaggcgcgctc, ceh-22_30, 30, 642, 65
agtcgaatttgcattgcaag, ceh-22_31, 31, 664, 40
aatttttacttgagtcggag, ceh-22_32, 32, 686, 35
tgtatcgatgattttggaac, ceh-22_33, 33, 708, 35
tccgtatgacttttttttgt, ceh-22_34, 34, 730, 30
aagcgccgcgtttattggct, ceh-22_35, 35, 752, 55
atgcattgggcattgtggta, ceh-22_36, 36, 774, 45
gccgctgtcgattgacttga, ceh-22_37, 37, 796, 55
cattgctcttgttggaaaac, ceh-22_38, 38, 818, 40
tcacggactagcattggtat, ceh-22_39, 39, 841, 45
tgtccgaagaacgagcagaa, ceh-22_40, 40, 864, 50
gtgtatggagatgttgagga, ceh-22_41, 41, 886, 45
attggcacttccaaatgcta, ceh-22_42, 42, 908, 40
aaggtgttggtaggtatcct, ceh-22_43, 43, 930, 45
gaagtggctgggaggtaggc, ceh-22_44, 44, 952, 65
aggtccgtttgaaaaatacc, ceh-22_45, 45, 974, 40
tcatgtaggaagaagctgct, ceh-22_46, 46, 996, 45
gaaggccaccattgagtatt, ceh-22_47, 47, 1018, 45