bootstrapping multiple parameters doesn't seem effective in the context of the boot package, despite claiming it can use a vector of stats. Certainly part of challenge is that different models have different numbers of parameters, so this isn't a fixed size vector. Approaching manually for the moment, inhibits use of bootstrap confidence intervals function from the boot package.
Some irregular behavior in bootstrapping parameters -- have to load package and then reload likelihood_bootstrap library source file or else bootstraps are NAs, needs further investigation.
formatting bootstrapping meaningfully -- following the ouch style for the moment
Sent Peter Wainwright a rough draft of Bio Let. manuscript.
Goals / ToDo
Add bootstraps of parameters to manuscript,
Function to bootstrap all parameters given list of all models. Plotting function also.