The Virus-Like Particles (VLP) team in the Swartz Lab focuses on developing Biotechnology-based solutions using VLPs. Early work using the cell free protein synthesis platform enabled the site-specific incorporation of non-natural amino acids into our VLPs that allows for the direct bioconjugation of functional molecules to the surface using "click" chemistry. In addition, recent work has allowed us to stablize the VLP with additional disulfide bonds as well as alter the surface charges to allow conjugation of wider variety of ligands. Current work is being done to modify the inner surface of the VLP to control loading of various therapeutic or diagnostic cargoes.
We are currently using our virus-like particle platform to address a range of human health problems such as circulating tumor cell enumeration, HIV and lymphoma vaccine design, cell-specific delivery of therapeutics for various diseases, and improved MRI of prostate cancer.
The VLP team currently consists of Benjamin Ko, Marcus Rohovie, Julie Fogarty, Maya Nagasawa, and Rinchu Mathew. Former members of the group include Brad Bundy, Wei Chan, Yuan Lu, Kedar Petal, and Chris VanLang.
1) VLPs as vaccine scaffolds (Julie Fogarty)
Over 30 years of focused HIV research efforts have been unable to produce a vaccine that elicits a clinically relevant response - of the 5 vaccine efficacy trials conducted, only one showed modest (31.2% efficacy) protection against HIV. Many groups, including the [Kim Lab] at Stanford, have worked on designing antigens that address the question of fusion protein mimetic design and stabilization, but a sufficient immune response has not yet been elicited using these molecules. We are working on using our VLP platform to boost the immune response to the antigen developed in the Kim Lab (and potentially other HIV antigens). Cell-free protein synthesis (previously developed in the Swartz Lab) allows us to incorporate non-natural amino acids on the surface of the VLPs (red Z above). These non-natural amino acids allow us to covalently link the antigen (and other ligands) to the outside of the VLP using 'click' chemistry - this allows us to stimulate a stronger immune response through a multivalent, ordered presentation of the antigen. We can also attach innate immune stimulatory agents, such as CpG DNA, to the outside of the VLP to further boost the immune response to the vaccine. Other vaccine thrusts in our lab have included a broadly neutralizing influenza vaccine and an anti-idiotype lymphoma vaccine.
2) VLPs for use as a drug delivery vehicle, including screening capabilities (Marcus Rohovie, Maya Nagasawa)
We have engineered a library of VLP mutants with different C-terminal extensions (blue squiggle above, shown with positive charges). These mutations alter the functionality of the extension - cationic interactions, anionic interactions, hydrophobic interactions, aromatic interactions, etc. - and will be used to show loading of various therapeutic cargo - chemotherapeutics for prostate cancer, dopamine for Parkinson's Disease, or nucleic acids for treatment of any genetic disorder or disease characterized by a non-functional enzyme.
Using the 'click' chemistry described above, we can attach antibody fragments that will enable the VLPs to bind to specific cells enabling targeted delivery of the loading therapeutic cargo. Upon binding to the targeted cell, the VLPs will be internalized via receptor-mediated endocytosis. After escaping the endosome (which can be assisted by displaying cell-penetrating peptides on the surface of the VLP as well), the reducing environment of the cytoplasm will reduce the stabilizing disulfide bonds in the VLP and allow it to deliver its cargo.
This method would allow higher doses of the therapeutics to be used since the specific targeting mechanisms of the VLP should reduce off-target side effects. Additionally, there is no modification needed to the drug to allow it to be delivered. Hence, the VLP could also be used as a high-throughput screen for novel drug development.
3) VLPs for use in medical imaging/diagnostics (Benjamin Ko, Rinchu Mathew)
Our third area of focus relies on targeting of VLPs to specific cells using cell-surface markers as above, but instead of delivering therapeutic cargo, we seek use the VLP as an imaging agent. We currently have two main topics in this area: using the VLP as an improved contrast agent for MRI of prostate cancer and using the VLP to enumerate circulating tumor cells. If we can enable early detection of prostate cancer or metastatic cancer, it would greatly improve the treatments and outlook for the patients.
To develop the VLP as an improved contrast agent for MRI, we will load super-paramagnetic iron oxide (SPIO) nanoparticles into the VLP. The VLPs will specifically target the prostate cancer cells, so only the tumors will show in the MRI. The high density of the SPIO-loaded VLPs will enable very specific imaging of the tumors as well - with the added benefit of reduced toxicity to the patient, since the SPIO is trapped within the VLP.
To develop the VLP for circulating tumor cell enumeration, we will not load any cargo. Instead, luciferase enzymes will be displayed on the surface of the VLP as well as the antibody fragments for targeting. This sensitive and easily detectable luminescence will enable development of a high-throughput circulating tumor cell enumeration screen using a common CCD camera.