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- 09:26, 3 May 2007 (hist) (diff) N Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-5-2 (New page: Polyphen code: This has been a rather frustrating search for something I know already exists. The pseudocode is as follows: Input: Coding sequence, mutation position, original amino acid...) (top)
- 09:20, 3 May 2007 (hist) (diff) User:Mdwang (top)
- 21:40, 2 May 2007 (hist) (diff) N Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-5-1 (New page: Here's the code for a function that compares a query and reference sequence, returning a list of mutation objects that specify its position in both sequences. Its based on the program wro...) (top)
- 07:30, 24 April 2007 (hist) (diff) Harvard:Biophysics 101/2007/04/19
- 09:07, 19 April 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Mdwang/2007-4-13 (top)
- 00:47, 17 April 2007 (hist) (diff) N Harvard:Biophysics 101/2007/Notebook:Mdwang/2007-4-13 (New page: Deliverable by April 19: Based on a list of rs ID's from the dbSNP search, return a list of gene loci and the cumulative percentage of mutation in the population for all disease related SN...)
- 00:39, 17 April 2007 (hist) (diff) Harvard:Biophysics 101/2007/04/12
- 13:22, 18 March 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Xiaodi Wu/2007-3-20
- 13:22, 18 March 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Xiaodi Wu/2007-3-20
- 13:04, 18 March 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Xiaodi Wu/2007-3-20
- 12:59, 18 March 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Xiaodi Wu/2007-3-20
- 01:27, 18 March 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Xiaodi Wu/2007-3-20
- 00:46, 15 March 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-3-15 (top)
- 23:52, 14 March 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-3-15
- 23:51, 14 March 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-3-15
- 23:51, 14 March 2007 (hist) (diff) N Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-3-15 (New page: The first thing I did was identify the orfs in the sequence. I could use my orf function from the last assignment, but I did it manually and found a start codon at position 62 and a stop ...)
- 02:59, 8 March 2007 (hist) (diff) Harvard:Biophysics 101/2007/Project (→Input Data)
- 02:59, 8 March 2007 (hist) (diff) Harvard:Biophysics 101/2007/Project (→Input Data)
- 02:58, 8 March 2007 (hist) (diff) Harvard:Biophysics 101/2007/Project (→Input Data)
- 02:49, 8 March 2007 (hist) (diff) Harvard:Biophysics 101/2007/Project (→Input Data)
- 02:32, 6 March 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-3-6 (top)
- 02:31, 6 March 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-3-6
- 02:31, 6 March 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-3-6
- 02:23, 6 March 2007 (hist) (diff) N Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-3-6 (New page: Notes: This isn't as clean as the sample output, but it compares two hardcoded strings and does mutation compatison. The functions package mutations and orfs into objects that could be ex...)
- 04:02, 3 March 2007 (hist) (diff) N Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-3-2 (New page: The basic functions now all work: I just need to format the output and tidy it up. The object containment wasn't as tight as I originally hoped. I think perhaps the most logical all-enco...) (top)
- 05:07, 1 March 2007 (hist) (diff) N Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-2-28 (New page: I've tried to design this program in a somehwat formulaic oo design. Clearly, I'm a bit rusty as it's taking alot longer than I thought it would. The program is still not yet complete, b...) (top)
- 03:06, 28 February 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-2-27 (top)
- 01:09, 28 February 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-2-27
- 01:04, 28 February 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-2-27
- 01:04, 28 February 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-2-27
- 14:19, 27 February 2007 (hist) (diff) N Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-2-27 (New page: Notes: I've decided to make an orf class that indexes to a list of codon classes. The mutation detection will be built into comparators for the class. It's taking me a bit to figure out e...)
- 06:55, 22 February 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-2-20 (top)
- 05:23, 22 February 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-2-20
- 05:19, 22 February 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-2-20
- 05:18, 22 February 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-2-20
- 05:14, 22 February 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-2-20
- 05:13, 22 February 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-2-20
- 05:12, 22 February 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-2-20
- 00:24, 20 February 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-2-20
- 00:23, 20 February 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-2-20
- 00:22, 20 February 2007 (hist) (diff) User:Mdwang
- 00:21, 20 February 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-2-13 (Removing all content from page) (top)
- 00:20, 20 February 2007 (hist) (diff) N Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-2-20 (New page: For anyone still trying to get clustalw working on a PC after reading the link [http://openwetware.org/wiki/Talk:Harvard:Biophysics_101/2007/02/13/install-clustalw#Windows here], the key s...)
- 00:09, 20 February 2007 (hist) (diff) N Image:Apoemod.fasta (top)
- 00:09, 20 February 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-2-13
- 00:08, 20 February 2007 (hist) (diff) N Image:Copy of apoe.fasta (top)
- 00:07, 20 February 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-2-13
- 20:50, 19 February 2007 (hist) (diff) Talk:Harvard:Biophysics 101/2007/02/13/install-clustalw (top)
- 20:41, 19 February 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-2-13
- 20:41, 19 February 2007 (hist) (diff) Harvard:Biophysics 101/2007/Notebook:Michael Wang/2007-2-13
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