Registry of Standard Biological Models

A collection of models of biological parts that can be freely reused and composed with each other to produce more complex models. A draft implementation of the registry is underway and collaborators are being sought.
Talk to us at - BioSysBio 2007, SB3.0, and iGEM Jamboree Workshop 2007
Goals To contribute to the Open Source Synthetic Biology effort. To store, curate and support models related to physical Biobricks. To drive and guide the experimental characterization of BioBricks. To enable the reuse of modular part models. To provide a forum for modelers to contribute to the BioBricks effort.	Activities Planning the architecture of a registry of standard biological models. Building a collection of standard biological models. Define a modeling description language that is: Machine readable Capable of describing gene expression networks Modular (standardized defined inputs/ouputs) Hierarchical (models are composable) Capable of describing models that can be related to experimental data.

---

Recent edits:

List of abbreviations: N This edit created a new page (also see list of new pages) m This is a minor edit b This edit was performed by a bot (±123) The page size changed by this number of bytes 27 April 2024      21:47  Flow and Pattern Asymmetries‎‎ 16 changes history +1,482‎ [Courtneychau‎ (16×)]       21:47 (cur | prev) −7‎ Courtneychau talk contribs (→‎Asymmetries in Microfluidics)       21:46 (cur | prev) 0‎ Courtneychau talk contribs (→‎Asymmetries in Microfluidics)       21:44 (cur | prev) +626‎ Courtneychau talk contribs (→‎Active Mixing Methods)       21:35 (cur | prev) −1‎ Courtneychau talk contribs (→‎Applications of Asymmetric Flow)       21:35 (cur | prev) +1‎ Courtneychau talk contribs (→‎Applications of Asymmetric Flow)       21:16 (cur | prev) −10‎ Courtneychau talk contribs (→‎Passive Mixing Methods)       21:16 (cur | prev) 0‎ Courtneychau talk contribs (→‎Passive Mixing Methods)       21:16 (cur | prev) +423‎ Courtneychau talk contribs (→‎Passive Mixing Methods)       21:04 (cur | prev) 0‎ Courtneychau talk contribs (→‎Mixing on the Microfluidic Scale)       21:01 (cur | prev) −1‎ Courtneychau talk contribs (→‎Mixing on the Microfluidic Scale)       20:54 (cur | prev) +32‎ Courtneychau talk contribs (→‎Mixing on the Microfluidic Scale)       20:51 (cur | prev) +300‎ Courtneychau talk contribs (→‎Reynolds Number (Re))       20:50 (cur | prev) −300‎ Courtneychau talk contribs (→‎Mixing on the Microfluidic Scale)       20:46 (cur | prev) +419‎ Courtneychau talk contribs (→‎Applications of Asymmetric Flow)       20:37 (cur | prev) 0‎ Courtneychau talk contribs (→‎Applications of Asymmetric Flow)       20:35 (cur | prev) 0‎ Courtneychau talk contribs (→‎References)      20:39  (Upload log)‎ [Rkeane‎; Courtneychau‎]       20:39 Courtneychau talk contribs uploaded File:Perry MicrofluidicMesoPhases 2.png ‎       13:13 Rkeane talk contribs uploaded File:FreeBoundaryMicrofluidicsTypes.png ‎      15:44  Free-Boundary Microfluidics - Robert Keane‎‎ 28 changes history +3,538‎ [Rkeane‎ (28×)]       15:44 (cur | prev) +56‎ Rkeane talk contribs (→‎Challenges and Outlook)       15:43 (cur | prev) +3‎ Rkeane talk contribs (→‎Challenges and Outlook)       15:42 (cur | prev) −13‎ Rkeane talk contribs (→‎Challenges and Outlook)       15:41 (cur | prev) +1,617‎ Rkeane talk contribs       15:34 (cur | prev) −5‎ Rkeane talk contribs (→‎Challenges)       15:34 (cur | prev) +805‎ Rkeane talk contribs (→‎Challenges)       15:27 (cur | prev) +1,289‎ Rkeane talk contribs (→‎Challenges)       15:12 (cur | prev) +18‎ Rkeane talk contribs       15:11 (cur | prev) −341‎ Rkeane talk contribs (→‎Acoustics)       15:09 (cur | prev) −20‎ Rkeane talk contribs (→‎Interfacial Tension)       15:08 (cur | prev) −60‎ Rkeane talk contribs (→‎Interfacial Tension)       15:05 (cur | prev) −304‎ Rkeane talk contribs (→‎Electrohydrodynamics)       15:01 (cur | prev) −1‎ Rkeane talk contribs (→‎Hydrodynamics)       15:01 (cur | prev) −32‎ Rkeane talk contribs (→‎Hydrodynamics)       14:59 (cur | prev) −220‎ Rkeane talk contribs (→‎Hydrodynamics)       14:57 (cur | prev) −80‎ Rkeane talk contribs (→‎Hydrodynamics)       14:56 (cur | prev) +1‎ Rkeane talk contribs (→‎Introduction)       14:55 (cur | prev) −60‎ Rkeane talk contribs (→‎Introduction)       14:55 (cur | prev) −20‎ Rkeane talk contribs       14:54 (cur | prev) +460‎ Rkeane talk contribs (→‎Hydrodynamics)       14:22 (cur | prev) +1‎ Rkeane talk contribs       13:32 (cur | prev) −12‎ Rkeane talk contribs (→‎References)       13:29 (cur | prev) −33‎ Rkeane talk contribs (→‎References)       13:20 (cur | prev) −85‎ Rkeane talk contribs       13:16 (cur | prev) +391‎ Rkeane talk contribs       11:38 (cur | prev) +46‎ Rkeane talk contribs (→‎Acoustics)       11:33 (cur | prev) +31‎ Rkeane talk contribs (→‎Interfacial Tension)       11:30 (cur | prev) +106‎ Rkeane talk contribs      03:24  Magni:Lab Members‎ diffhist +333‎ Lorenzo Pasotti talk contribs 26 April 2024      11:38  Hu:Publications‎ diffhist +308‎ Hugangqing talk contribs N    08:47  The Paper that Launched Microfluidics - Xi Ning‎‎ 2 changes history +16,815‎ [Xning098‎ (2×)]       08:47 (cur | prev) −1‎ Xning098 talk contribs (→‎Introduction) N     08:43 (cur | prev) +16,816‎ Xning098 talk contribs (Created page with "{{Template:CHEM-ENG590E}} ==Introduction== Microfluidics is the science and technology of systems that process or manipulate small (10 <sup> -18 </sup> to 10 <sup>−18 </sup> litres) amounts of fluids, using channels with dimensions of tens to hundreds of micrometres, as stated by George Whitesides. <sup> https://doi.org/10.1038/nature05058 1 </sup>. Microfluidic devices are microchemical systems such as labs on the chip, organs on the chip and plants on the chip....")

---

• See this page for a draft implementation.
• See this page for a draft on model implementations following CellML 1.1.