Nollmann:Publications

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DNA Molecular Motors

SpoIIIE strips proteins off the DNA during chromosome translocation.
Marquis KA, Burton BM, Nollmann M, Ptacin JL, Bustamante C, Ben-Yehuda S, Rudner DZ.
Genes Dev. 2008 Jul 1;22(13):1786-95. [<a href="papers/Marquis2008Genes DevSpoIIIE strips proteins off the.pdf">PDF</a>]

Dynamics of Neutrophil Migration in Lymph Nodes during Infection.
Chtanova* T, Schaeffer* M, Han SJ, van Dooren GG, Nollmann M, Herzmark P, Chan SW, Satija H, Camfield K, Aaron H, Striepen B, Robey EA.
Immunity. 29(3):487-96, Sep 2008 [* Equal contributions] [<a href="papers/Schaeffer_immunity.pdf">PDF</a>]

Sequence-directed DNA export guides chromosome translocation during sporulation in Bacillus subtilis.
Nollmann M and Ptacin JL, Becker EC, Cozzarelli NR, Pogliano K, Bustamante C.
Nature SMB 15(5):485-93, May 2008 [<a href="papers/Ptacin2008Nat Struct Mol Biol.

Multiple modes of Escherichia coli DNA gyrase activity revealed by force and torque.
Nöllmann M, Stone MD, Bryant Z, Gore J, Crisona NJ, Hong, Mitelheiser, Maxwell, Bustamante C, Cozzarelli NR.
Nature SMB 14(4):264-71, Apr 2007 [<a href="papers/Nollmann2007Nat Struct Mol BiolMultiple modes of Escherichia coli.pdf">PDF</a>]

30 years of gyrase: from in vivo function to in vitro mechanism
Nöllmann M, Crisona NJ, Arimondo PB.
Biochimie. 89(4):490-9. Apr 2007 [<a href="papers/Nollmann2007BiochimieThirty years of Escherichia coli.pdf">PDF</a>]

Identification of the FtsK sequence-recognition domain.
Ptacin JL, Nollmann M, Bustamante C, Cozzarelli NR.
Nature SMB 13(11):1023-5, Nov 2006.

Giant Proteins that Move DNA: Bullies of the Genomic Playground
Cozzarelli NR, Cost G, Nollmann M, Viard T, Stray JE
Nature Reviews MCB 7:580-8 Aug 2006 [<a href="papers/Cozzarelli2006Nat Rev Mol Cell BiolGiant proteins that move DNA.pdf">PDF</a>]

DNA overwinds when stretched
Gore J, Bryant Z, Nollmann M, Le MU, Cozzarelli NR, Bustamante C.
Nature. AOP 442(7104):836-9, Aug 2006. [<a href="papers/Gore2006DNAoverwindsWhenStretched.pdf">PDF</a>]

Mechanochemical analysis of DNA gyrase using rotor bead tracking.
Gore J, Bryant Z, Stone MD, Nollmann M, Cozzarelli NR, Bustamante C.
Nature 439(7072):100-4, Jan 2006 [<a href="papers/Gore2005Naturegyrase06.pdf">PDF</a>]

A global multi-technique approach to study low-resolution solution structures
Nollmann M, Marshall W Stark and Byron O
J of Appl. Crystallography 38: 874-887 Part 6, Dec 2005 [<a href="papers/Nöllmann2005logoA global multi-technique approach to.pdf">PDF</a>]

Behavior of Tn3 Resolvase in Solution and Its Interaction with res.
Nollmann M, Byron O, Stark WM.
Biophys J. 89(3):1920-31, Sep 2005 [<a href="papers/Nollmann2005Biophys JBehavior of Tn3 resolvase in.pdf">PDF</a>]

Low-resolution reconstruction of a synthetic DNA holliday junction.
Nollmann M, Stark WM, Byron O.
Biophys J. 86 (5):3060-9,May 2004 [<a href="papers/Nollmann2004Biophys JLow-resolution reconstruction of a synthetic.pdf">PDF</a>]

Solution structure of the Tn3 resolvase-crossover site synaptic complex.
Nollmann M, He J, Byron O, Stark WM.
Molecular Cell 8;16(1):127-37, Oct 2004 [<a href="papers/Nollmann2004Mol CellSolution structure of the Tn3.pdf">PDF</a>]

A model for Protein-DNA Interaction Dynamics
Etchegoin P, Nollmann M.,
J. Theor. Biol. 220(2): 233-239, Jan 2003 [<a href="papers/Etchegoin2003J Theor BiolA model for protein-DNA interaction.pdf">PDF</a>]

Bacterial protein toxins: Pneumolysin

SOMO (SOlution MOdeler) differences between X-Ray- and NMR-derived bead models suggest a role for side chain flexibility in protein hydrodynamics.
Rai N, Nollmann M, Spotorno B, Tassara G, Byron O, Rocco M.
Structure (Camb). 13(5):723-34, May 2005

The role of cholesterol in the activity of pneumolysin, a bacterial protein toxin
Nollmann M, Gilbert R, Mitchell T, Sferrazza M, Byron
Biophys J. 86 (5):3141-51, May 2004

Solution structure and oligomerization behavior of two bacterial toxins: pneumolysin and perfringolysin o.
Solovyova AS, Nollmann M, Mitchell TJ, Byron O.
Biophys J. 87 (1):540-52, Jul 2004

Protein vibrations and hydration layer

Origin of the lognormal shape in the boson-peak of globular proteins,
Nollmann M, Etchegoin P,
Physica A, 294 (1-2): 44-50 May 2001

           Universal low-frequency vibrations of proteins from a simple interaction potential
Nollmann M, Etchegoin P,
Physical Review E 60 (4): 4593-4596, Oct 1999 [<a href="papers/Nollmann1999Phys Rev EUniversal low-frequency vibrations of proteins.pdf">PDF</a>]

Photoinduced oxygen dynamics in lyophilized hemoglobin
Nollmann M, Etchegoin P.
Spectrochimica Acta Part A - 56 (14): 2817-2829, DEC 2000 [<a href="papers/Nollmann2000Spectrochim Acta A Mol Biomol SpectroscPhotoinduced oxygen dynamics in lyophilized.pdf">PDF</a>]

Heat does not come in different colours: entropy-enthalpy compensation, free energy windows, quantum confinement, pressure perturbation calorimetry, solvation and the multiple causes of heat capacity effects in biomolecular interactions
Cooper A, Johnson CM, Lakey JH, Nollmann M.
Biophys. Chem. 93 (2-3): 215-230 Sp. Iss. SI, 2002 [<a href="papers/Cooper2001Biophys ChemHeat does not come in.pdf">PDF</a>]

Liquid Crystals

Photobleaching and reorientational dynamics of dyes in a nematic liquid crystal
Nollmann M, Shalom D, Etchegoin P, Sereni J,
Physical Review E 59 (2): 1850-1859, Feb 1999 [<a href="papers/Nollmann1999Phys Rev EPhotobleaching and reorientational dynamics of.pdf">PDF</a>]

Phonon self-energies and phase transitions in a prototype discotic liquid crystal
Nollmann M, Etchegoin P
Physical Review E 61 (5): 5345-5348, May 2000 [<a href="papers/Nollmann2000Phys Rev EPhonon self-energies and phase transitions.pdf">PDF</a>]

Coupling between molecular vibrations and liquid crystalline order parameters
Nollmann M, Etchegoin P
Physical Review E 61 (6):7235-7238, Jun 2000 [<a href="papers/Nollmann2000Phys Rev ECoupling between molecular vibrations and.pdf">PDF</a>]

Comment on "Photon transmission technique for studying multiple phase transitions in a liquid crystal.
Etchegoin P, Nollmann M
Physical Review E 61 (6): 7256-7258, Jun 2000