NielsenLab:Publications

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Recent Publications

Nielsen, D.R., Leonard, E., Yoon S.H., Tseng, H.C., Yuan, C.J., and Prather, K.J., (2009). Engineering Alternative Butanol Production Platforms in Heterologous Bacteria. Metab. Eng. Accepted.

Leonard, E., Nielsen, D., Solomon, K., and Prather, K.J., (2008). Engineering Microbes with Synthetic Biology Frameworks, Trends Biotechnol., 26(12): 674-681.

Nielsen, D.R. and Prather, K.J., (2009). In Situ Product Recovery of n-Butanol Using Polymeric Resins, Biotechnol. Bioeng., 102(3): 811-821.

Martin, C.H., Nielsen, D.R., Solomon, K.V., and Prather, K.J., (2009). Synthetic Metabolism: Engineering Biology at the Protein and Pathway Scales, Chem. Biol., 16: 277-286.

Tseng, H.C., Martin, C.H., Nielsen, D.R., and Prather, K.J., (2009). Metabolic engineering of Escherichia coli for the enhanced production of (R)- and (S)-3-hydroxybutyrate. Appl. Environ. Microb. doi:10.1128/AEM.02667-08.

Past Publications

Nielsen, D.R., Daugulis, A.J., and McLellan, P.J., (2007), Dynamic Simulation of Benzene Vapor Treatment by a Two-Phase Partitioning Bioscrubber. Part I: Model Development, Parameter Estimation, and Parametric Sensitivity, Biochem. Eng. J., 36(3): 239-249.

Nielsen, D.R., Daugulis, A.J., and McLellan, P.J., (2007), Dynamic Simulation of Benzene Vapor Treatment by a Two-Phase Partitioning Bioscrubber. Part II: Model Calibration, Validation, and Predictions, Biochem. Eng. J., 36(3): 250-261.

Nielsen, D.R., Sask, K.N., McLellan, P.J., and Daugulis, A.J. (2006), Benzene Vapor Treatment using a Two-Phase Partitioning Bioscrubber: An Improved Steady-State Protocol to Enhance Long-Term Operation, Bioproc. Biosyst. Eng., 29(4): 229-240.

Nielsen, D.R., McLellan, P.J., and Daugulis, A.J. (2006), Direct Estimation of the Oxygen Requirements of Achromobacter xylosoxidans for Aerobic Degradation of Monoaromatic Hydrocarbons (BTEX) in a Bioscrubber, Biotechnol. Lett., 28(16): 1293-1298.

Nielsen, D.R., Daugulis, A.J., and McLellan, P.J. (2005), Transient Performance of a Two-Phase Partitioning Bioscrubber Treating a Benzene-Contaminated Gas Stream, Environ. Sci. Technol., 39(22): 8971-8977.

Nielsen, D.R., Daugulis, A.J., and McLellan, P.J. (2005), A Restructured Framework for Modeling Oxygen Transfer in Two-Phase Partitioning Bioreactors, Biotechnol. Bioeng., 91(6): 773-777.

Nielsen, D.R., Daugulis, A.J., and McLellan, P.J. (2005), Quantifying Maintenance Energy Requirements from the Steady-State Operation of a Two-Phase Partitioning Bioscrubber, Biotechnol. Bioeng., 90(2): 248-257.

Nielsen, D.R., Daugulis, A.J., and McLellan, P.J. (2003), A Novel Method of Simulating Oxygen Transfer in Two-Phase partitioning Bioreactors, Biotechnol. Bioeng, 83(6): 735-741.

Ma, H., Nielsen, D. R., Bowman, C. N., and Davis, R. H. (2001), Membrane Surface Modification and Backpulsing for Wastewater Treatment, Sep. Sci. Tech., 36: 1553-1569.