Knight:Synthetic promoter design
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Notes on results of various synthetic promoter designs.
Sequences
Heterodimers: -35 -10 Promoter1 cacgtgtgcgtgggTTGACAcgtgtgcgtgggaagtcGATACTgagcaca Promoter2 TTGACAcgtgtgcgtgggaagtcGATACTtagattcacgtgtgcgtggg Promoter3 cacgtgtgcgtgggTTGACAcgtgtgcgtgggaagtcGATACTtagattcacgtgtgcgtggg Promoter4 cacgtgtgcgtgggTTGACAcacgtgtgcgtgggaatGATACTgagcaca Promoter5 TTGACAcacgtgtgcgtgggaatGATACTtagattcacgtgtgcgtggg Promoter6 cacgtgtgcgtgggTTGACAcacgtgtgcgtgggaatGATACTtagattcacgtgtgcgtggg
Homodimers: -35 -10 BBa_R2000 agtttattcTTGACAtggtcccacgcgcgtggGATACTacgtcag BBa_R2001 agtttattcTTGACAtggtcatattacggtgaGATACTcccacgcgcgtggg BBa_R2002 agtttattcTTGACAtggtcccacgcgcgtggGATACTcccacgcgcgtggg Promoter8 tttatcaaaaagagtgTTGACAtttttaagtcccacgcgTGGGATtagattcataaatttgagagaggagtt Promoter10 tttatcaaaaagagtgTTGACAtttttaagctcccacgcgTGGGTtagattcataaatttgagagaggagtt Promoter12 tttatcaaaaagagtgTTGACAtttttaatcccacgcgTGGGAATtagattcataaatttgagagaggagtt Promoter9 tttatcaaaaagagtgTTGATCccacgcgtgggatatagGATACTtagattcataaatttgagagaggagtt Promoter11 tttatcaaaaagagtgTTGACTCccacgcgtgggaatagGATACTtagattcataaatttgagagaggagtt Promoter13 tttatcaaaaagagtgTTGTCccacgcgtgggactatagGATACTtagattcataaatttgagagaggagtt
Results
Name | Synthesized (Issues) | Promotes (Strength) | Represses |
Promoter1 | |||
Promoter2 | |||
Promoter3 | |||
Promoter4 | |||
Promoter5 | |||
Promoter6 | |||
Promoter7 | |||
BBa_R2000 | |||
BBa_R2001 | |||
BBa_R2002 | |||
Promoter8 | |||
Promoter9 | |||
Promoter10 | |||
Promoter11 | |||
Promoter12 | |||
Promoter13 |