Construct verification via cPCR
- negative controls from yesterday look good (no growth); thus the antibiotics worked!
- no growth for loxR-pSB1C3 triplicate number 3; thus used a colony from spot plate instead
cPCR
- cPCRed ~1ul of each liquid culture via standard UBC iGEM cPCR protocol (using autoclaved wooden sticks)
- The cultures were: (each in triplicate)
- pSB1C3 + LoxR
- pSB1A3 + LoxR
- pSB1C3 + Cre-LVA
- pSB1A3 + Cre-LVA
Forward (FW): VF2
Reverse (RE): VR2
- reagents for each reaction (μL)
- 10x reaction buffer: 2.5
- 10μM Forward primer: 1.25
- 10μM Reverse primer: 1.25
- 10mM dNTP: 0.5
- sdH20: 18.3
- liquid culture: ~1 (transferred using autoclaved wooden stick)
- PCR steps [temperature | time ]
- Initial denaturation: 94°C | 120s
- Denaturation: 94°C | 30s
- Annealing: 56°C | 30s
- Extension: 72°C | 72s
- Final extension: 72°C | 216s
- Step 2-4 repeated 30 cycles
Correct bands were observed, suggesting that the constructs were successful. One correct band from each construct will be miniprepped (Aug 20)
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