Eisen:Downloads

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• AMPHORA - automated phylogenomic analysis for genomes and metagenomics http://bobcat.genomecenter.ucdavis.edu/AMPHORA/
• Compost Bin - Metagenomic Binning by PCA. Download http://bobcat.genomecenter.ucdavis.edu/souravc/compostbin/
• STAP - rRNA alignment and taxonomy pipeline. Download http://bobcat.genomecenter.ucdavis.edu/mediawiki/index.php/STAP_download
• WATERS - a Workflow for the Alignment, Taxonomy and Ecology of Ribosomal Sequences: http://bobcat.genomecenter.ucdavis.edu/mediawiki/index.php/WATERS