Yeast artificial chromosomes

From OpenWetWare
Revision as of 20:52, 17 April 2006 by Tk (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to navigationJump to search

Yeast artificial chromosomes (YACs) are synthetic double stranded linear constructs containing the elements necessary for replication in yeast. These elements are:

  • an autonomous replication sequence (ARS)
  • a centromere
  • a telomeric sequence at each end

Typically the chromosome also contains a selection marker such as Lys2 or Ura3.

A common tool for constructing YACs is a shuttle plasmid such as pYAC4 which replicates in E. coli, has a multiple cloning site, and a pair of telomeres which can be cleaved to form a linear fragment. Available as an E.coli plasmid ATCC 67379, sequence at U01086. Yeast host AB1380 is available as ATCC 204682.

Minimal size for a YAC is between 50kb and 100kb, while maximum sizes are 1Mb to 3Mb.

  1. pmid= 3033825

    [Burke87]
  2. Anand R, Villasante A, and Tyler-Smith C. Construction of yeast artificial chromosome libraries with large inserts using fractionation by pulsed-field gel electrophoresis. Nucleic Acids Res. 1989 May 11;17(9):3425-33. DOI:10.1093/nar/17.9.3425 | PubMed ID:2542900 | HubMed [Anand89]
  3. Sgaramella V, Ferretti L, Damiani G, and Sora S. A procedure for cloning restriction fragments of DNA as single inserts in yeast artificial chromosomes. Biochem Int. 1990;20(3):503-10. PubMed ID:2189412 | HubMed [Sgaramella90]
  4. Wells RA, Germino GG, Krishna S, Buckle VJ, and Reeders ST. Telomere-related sequences at interstitial sites in the human genome. Genomics. 1990 Dec;8(4):699-704. DOI:10.1016/0888-7543(90)90257-u | PubMed ID:2276741 | HubMed [Wells90]
  5. Burke DT and Olson MV. Preparation of clone libraries in yeast artificial-chromosome vectors. Methods Enzymol. 1991;194:251-70. DOI:10.1016/0076-6879(91)94020-d | PubMed ID:2005791 | HubMed [Burke91]
  6. Ragoussis J, Trowsdale J, and Markie D. Mitotic recombination of yeast artificial chromosomes. Nucleic Acids Res. 1992 Jun 25;20(12):3135-8. DOI:10.1093/nar/20.12.3135 | PubMed ID:1620611 | HubMed [Ragoussis92]
  7. de Bruin D, Lanzer M, and Ravetch JV. Characterization of yeast artificial chromosomes from Plasmodium falciparum: construction of a stable, representative library and cloning of telomeric DNA fragments. Genomics. 1992 Oct;14(2):332-9. DOI:10.1016/s0888-7543(05)80223-x | PubMed ID:1427849 | HubMed [deBruin92]
  8. Kuhn RM and Ludwig RA. Complete sequence of the yeast artificial chromosome cloning vector pYAC4. Gene. 1994 Apr 8;141(1):125-7. DOI:10.1016/0378-1119(94)90139-2 | PubMed ID:8163163 | HubMed [Kuhn94]
  9. Mahmood A, Kimura T, Takenaka M, and Yoshida K. The construction of mobilizable YACs and their direct conjugative transfer from E. coli to yeasts. Nucleic Acids Symp Ser. 1995(34):45-6. PubMed ID:8841544 | HubMed [Mahmood95]
  10. Mahmood A, Kimura T, Takenaka M, and Yoshida K. The construction of novel mobilizable YAC plasmids and their behavior during trans-kingdom conjugation between bacteria and yeasts. Genet Anal. 1996 Jul;13(2):25-31. DOI:10.1016/1050-3862(95)00146-8 | PubMed ID:8880145 | HubMed [Mahmood96]
  11. Cocchia M, Kouprina N, Kim SJ, Larionov V, Schlessinger D, and Nagaraja R. Recovery and potential utility of YACs as circular YACs/BACs. Nucleic Acids Res. 2000 Sep 1;28(17):E81. DOI:10.1093/nar/28.17.e81 | PubMed ID:10954614 | HubMed [Cocchia00]

All Medline abstracts: PubMed | HubMed