Wikiomics:Docking toolbox: Difference between revisions
From OpenWetWare
Jump to navigationJump to search
m (1 revision(s)) |
Darek Kedra (talk | contribs) m (+ credits) |
||
| Line 23: | Line 23: | ||
* very good review by Aatu Kaapro Janne Ojanen from 2002: [http://www.lce.hut.fi/teaching/S-114.500/2002/Protdock.pdf] | * very good review by Aatu Kaapro Janne Ojanen from 2002: [http://www.lce.hut.fi/teaching/S-114.500/2002/Protdock.pdf] | ||
== Credits == | |||
{{credits}} | |||
* [[User:Darked|Darek Kedra]] wrote this tutorial | |||
<!-- other contributors, put yourself here --> | |||
Revision as of 14:58, 23 November 2007
Following programs are used for docking small molecules into protein pockets/active sites:
Comercial
- FlexX [1] (both stand alone and Sybyl/MOE module) Sybyl docking tutorial: [2] $$$
- GOLD [3] $$$
- ICM (docking) [4] $$$
- GLIDE [5] $$$
Free/Semi Free??
!! needs verification as of Nov 2006!!
Reviews
- Sperandio O, Miteva MA, Delfaud F, Villoutreix Receptor-based computational screening of compound databases: the main docking-scoring engines.Curr Protein Pept Sci. 2006 Oct;7(5):369-93.
- Muegge, M Rarey - mall molecule docking and scoring Reviews in Computational Chemistry, Dec 2001 [9]
- very good review by Aatu Kaapro Janne Ojanen from 2002: [10]
Credits
- Darek Kedra wrote this tutorial
