Wikiomics:Docking toolbox
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* very good review by Aatu Kaapro Janne Ojanen from 2002: [http://www.lce.hut.fi/teaching/S-114.500/2002/Protdock.pdf] | * very good review by Aatu Kaapro Janne Ojanen from 2002: [http://www.lce.hut.fi/teaching/S-114.500/2002/Protdock.pdf] | ||
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| + | == Credits == | ||
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| + | {{credits}} | ||
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| + | * [[User:Darked|Darek Kedra]] wrote this tutorial | ||
| + | <!-- other contributors, put yourself here --> | ||
Revision as of 17:58, 23 November 2007
Following programs are used for docking small molecules into protein pockets/active sites:
Contents |
Comercial
- FlexX [1] (both stand alone and Sybyl/MOE module) Sybyl docking tutorial: [2] $$$
- GOLD [3] $$$
- ICM (docking) [4] $$$
- GLIDE [5] $$$
Free/Semi Free??
!! needs verification as of Nov 2006!!
Reviews
- Sperandio O, Miteva MA, Delfaud F, Villoutreix Receptor-based computational screening of compound databases: the main docking-scoring engines.Curr Protein Pept Sci. 2006 Oct;7(5):369-93.
- Muegge, M Rarey - mall molecule docking and scoring Reviews in Computational Chemistry, Dec 2001 [9]
- very good review by Aatu Kaapro Janne Ojanen from 2002: [10]
Credits
- Darek Kedra wrote this tutorial
