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| Information on the experimental protocol: [http://en.wikipedia.org/wiki/Chip-Sequencing ChIP-Sequencing]
| | For description of the method see: http://en.wikipedia.org/wiki/Chip-Sequencing |
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| == Programs for ChIP-seq data analysis == | | =Software= |
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| === Peak calling ===
| | * [http://smithlab.cmb.usc.edu/smithlab/index.php/software/rseg RSEG] |
| [http://liulab.dfci.harvard.edu/CEAS/ MACS] | |
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| [http://www.bcgsc.ca/platform/bioinfo/software/findpeaks FindPeaks]
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| === Downstream analysis ===
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| [http://liulab.dfci.harvard.edu/CEAS/ CEAS]
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| == See also ==
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| [http://openwetware.org/wiki/Wikiomics:ChIP-chip ChIP-chip]
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| == Credits ==
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| Please contribute your links and comments
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| * [[User:Samuli Eldfors|Samuli Eldfors]] Initiated page
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| [[Category:Protocol]] [[Category:In silico]] [[Category:Data analysis]]
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Latest revision as of 16:28, 9 November 2010
