Van Oudenaarden Lab:ZK652.5
Progress:
Probes designed: (03-01-2010 - Alexander van Oudenaarden)
Probes coupled:
Probes purified:
Probes tested:
Dyes available:
>ZK652.5 (ceh-23 spliced coding region + 3'-UTR)
atggacacccatcttccattccaaactttgccagtttcaacgccgctgcctgtgtcttcatcatctctaacagacgttct tcaaacaattgctgctttacaagcctgtcccacatcctgtataccttcaacatcaactggaatgctttcaccgaatcttc ccttctcggctacaattccacgtgtcaacttgttcccaccatcacaaccagccaattctttaatactgccaacaattcca gcacagccttttattccaaatccatctctcctgcaagccaatccatctgctgtcgaagctcttgcaaatgcactttttgc aacaacaagccgtcgggcttcttgcccagaacctcctgcatcctctcaagcaaccgtcacgcttcaagtcccatctacgg gttctccagaacgacgacgttattcagaaacaaatatggaggttctgctacgtgaacaacttgcacaattgatgcctcca acctctcaactacccggaatgcctggatgttattatcaacatgttccagctgctggaacttcaggaattcaaggatcatt agatgcggcgttaatgggagctgttcccttggctatgaatagtatggcacatagtcggagagcagcaaatcatagaaaag caagaacaatctacggtacaacacaaactcaacaactggaagatatgtttaaaggacaaatgtacgtagtcggagcagaa cgagaaaatcttgctcaacgccttggcctatcaccttctcaagttagaatttggtttcaaaaccggagaagcaaacatcg taggaaacaacaagaggagcaacagagcacgacgttagaagaaaaatctgaagaaattggaaaagatgaagaggaagatg atgaagaagatgaagatgatgtaaaagttctgaattaa
tttaattttttttttcgtgtttacttgtttatttcctgccatattctgttttagaaaataattaga aaaaatgtgtatattcttgattataaagcattaaacaaataaagttttatgtgaactt
Name of probe set: ceh-23
Probes designed on Mon, 01 Mar 10 12:32:28 -0700
47 probes designed for target of length 1042 (target too short for 48 probes)
Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC
aatggaagatgggtgtccat, ceh-23_1, 1, 1, 45
cgttgaaactggcaaagttt, ceh-23_2, 2, 23, 40
atgatgaagacacaggcagc, ceh-23_3, 3, 45, 50
gtttgaagaacgtctgttag, ceh-23_4, 4, 67, 40
acaggcttgtaaagcagcaa, ceh-23_5, 5, 89, 45
ttgaaggtatacaggatgtg, ceh-23_6, 6, 111, 40
ggtgaaagcattccagttga, ceh-23_7, 7, 133, 45
tgtagccgagaagggaagat, ceh-23_8, 8, 155, 50
ggaacaagttgacacgtgga, ceh-23_9, 9, 177, 50
agaattggctggttgtgatg, ceh-23_10, 10, 200, 45
ctggaattgttggcagtatt, ceh-23_11, 11, 222, 40
ggatttggaataaaaggctg, ceh-23_12, 12, 244, 40
atggattggcttgcaggaga, ceh-23_13, 13, 267, 50
atttgcaagagcttcgacag, ceh-23_14, 14, 290, 45
cggcttgttgttgcaaaaag, ceh-23_15, 15, 313, 45
aggttctgggcaagaagccc, ceh-23_16, 16, 335, 60
cggttgcttgagaggatgca, ceh-23_17, 17, 357, 55
gtagatgggacttgaagcgt, ceh-23_18, 18, 379, 50
acgtcgtcgttctggagaac, ceh-23_19, 19, 401, 55
cctccatatttgtttctgaa, ceh-23_20, 20, 423, 35
gcaagttgttcacgtagcag, ceh-23_21, 21, 445, 50
agaggttggaggcatcaatt, ceh-23_22, 22, 467, 45
atccaggcattccgggtagt, ceh-23_23, 23, 489, 55
gctggaacatgttgataata, ceh-23_24, 24, 511, 35
ttgaattcctgaagttccag, ceh-23_25, 25, 533, 40
ttaacgccgcatctaatgat, ceh-23_26, 26, 555, 40
atagccaagggaacagctcc, ceh-23_27, 27, 577, 55
ccgactatgtgccatactat, ceh-23_28, 28, 599, 45
cttttctatgatttgctgct, ceh-23_29, 29, 621, 35
gttgtaccgtagattgttct, ceh-23_30, 30, 643, 40
atcttccagttgttgagttt, ceh-23_31, 31, 665, 35
cgtacatttgtcctttaaac, ceh-23_32, 32, 687, 35
ttttctcgttctgctccgac, ceh-23_33, 33, 709, 50
taggccaaggcgttgagcaa, ceh-23_34, 34, 731, 55
aaattctaacttgagaaggt, ceh-23_35, 35, 753, 30
ttgcttctccggttttgaaa, ceh-23_36, 36, 775, 40
ctcttgttgtttcctacgat, ceh-23_37, 37, 797, 40
ctaacgtcgtgctctgttgc, ceh-23_38, 38, 819, 55
ccaatttcttcagatttttc, ceh-23_39, 39, 841, 30
atcatcttcctcttcatctt, ceh-23_40, 40, 863, 35
ttacatcatcttcatcttct, ceh-23_41, 41, 885, 30
aaattaaattaattcagaac, ceh-23_42, 42, 907, 15
aaacaagtaaacacgaaaaa, ceh-23_43, 43, 929, 25
ctaaaacagaatatggcagg, ceh-23_44, 44, 953, 40
acacattttttctaattatt, ceh-23_45, 45, 975, 15
aatgctttataatcaagaat, ceh-23_46, 46, 997, 20
tcacataaaactttatttgt, ceh-23_47, 47, 1019, 20
