Van Oudenaarden Lab:K03A11.3
Progress:
Probes designed: (03-01-2010 - Alexander van Oudenaarden)
Probes coupled:
Probes purified:
Probes tested:
Dyes available:
>K03A11.3 (ceh-28 spliced coding region + 3'-UTR)
atgcaatctacgcagatttcatctactactgttattttaccaagtgaagtgatccaaccgccacagcaatctgcagttcc ttcagagtttaaaaatacacttccgtcgcgtttaaatctatttgaaggttttgatcagtcattttctgaacttacaaatc catatcaaccagttattccgttgatgcagagagaatccttgttaggtgcaagttcatattatagttctccaagtcaaaat cagagatcttatcagaatcaccgtcaacattctaatccagatactatcaatctgagatcacaacagcagaagagaaaacc gagagttttgttcacacaacatcaggttaatgaacttgaagaacgatttaaaaagcaacgttatgtgacagccactgagc gagaagagctagcccaatgtcttggcctcacagccacacaagtgaaaatttggtttcaaaatcgccgatacaaatgcaag cggttagcccaggacagaaccttacaattgagccagatccctttcaatccaatgtttgcatcagcatttccatttggaat aaacagctttggaactgcaccatcgtcttcttcgtctggatcatga
ttttttttttcaattttttcttcatatttatagctatttttcttttcaattaca ctgtttaacttttgagacgcatatttaacaaaataaataaaaacacacaga
Name of probe set: ceh-28
Probes designed on Mon, 01 Mar 10 12:42:35 -0700
32 probes designed for target of length 711 (target too short for 48 probes)
Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC
gaaatctgcgtagattgcat, ceh-28_1, 1, 1, 40
tggtaaaataacagtagtag, ceh-28_2, 2, 23, 30
gtggcggttggatcacttca, ceh-28_3, 3, 45, 55
tctgaaggaactgcagattg, ceh-28_4, 4, 67, 45
cgcgacggaagtgtattttt, ceh-28_5, 5, 91, 45
caaaaccttcaaatagattt, ceh-28_6, 6, 114, 25
gtaagttcagaaaatgactg, ceh-28_7, 7, 136, 35
ggaataactggttgatatgg, ceh-28_8, 8, 160, 40
caaggattctctctgcatca, ceh-28_9, 9, 182, 45
tataatatgaacttgcacct, ceh-28_10, 10, 204, 30
ctctgattttgacttggaga, ceh-28_11, 11, 226, 40
ttgacggtgattctgataag, ceh-28_12, 12, 248, 40
tgatagtatctggattagaa, ceh-28_13, 13, 270, 30
ttctgctgttgtgatctcag, ceh-28_14, 14, 292, 45
gaacaaaactctcggttttc, ceh-28_15, 15, 314, 40
gttcattaacctgatgttgt, ceh-28_16, 16, 336, 35
tgctttttaaatcgttcttc, ceh-28_17, 17, 358, 30
ctcagtggctgtcacataac, ceh-28_18, 18, 380, 50
gacattgggctagctcttct, ceh-28_19, 19, 402, 50
acttgtgtggctgtgaggcc, ceh-28_20, 20, 424, 60
ggcgattttgaaaccaaatt, ceh-28_21, 21, 447, 35
gctaaccgcttgcatttgta, ceh-28_22, 22, 469, 45
caattgtaaggttctgtcct, ceh-28_23, 23, 491, 40
ttggattgaaagggatctgg, ceh-28_24, 24, 513, 45
aatggaaatgctgatgcaaa, ceh-28_25, 25, 535, 35
agttccaaagctgtttattc, ceh-28_26, 26, 557, 35
cagacgaagaagacgatggt, ceh-28_27, 27, 579, 50
attgaaaaaaaaaatcatga, ceh-28_28, 28, 601, 15
tagctataaatatgaagaaa, ceh-28_29, 29, 623, 20
acagtgtaattgaaaagaaa, ceh-28_30, 30, 645, 25
aaatatgcgtctcaaaagtt, ceh-28_31, 31, 667, 30
gtgtgtttttatttattttg, ceh-28_32, 32, 689, 20
