Van Oudenaarden Lab:F48D6.3

Progress:

Probes designed: (03-01-2010 - Alexander van Oudenaarden)

Probes coupled:

Probes purified:

Probes tested:

Dyes available:

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>F48D6.3 (hlh-13 spliced coding region)

atgacagcttcatcttctgggtgtggcggtttaccagtttcccagtgtccctcttattcctcactttcaaagctcttctt tatggattcatcgtatgattcatattactgcgaggagcccgaggagcgacaaactgcttcaattcgtgagaggaagagaa tgtgtagtattaatgtggcatttattgagctccgcaattatattccaacatttccttatgaaaaacggctctctaaaatt gataccttgaacctggcaattgcatatatcaatatgttggatgacgttctgagaacacccgaagattctggtcagtatat tcaaaagtgtgttcatatggctcgcacaggtcaaatcggtgcaccagcgtggagtacaagtgatttgctagcccggctca attggatcaagtggcgtcgtcttggaatcgagccgattgcctaa

acaaactctgtgtatgcgtaaacggcagaa agcaaaataccttttaattgtattttccacgaatacaactcatgattttctatctttcatttcaataaacatactgatta

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Name of probe set: hlh-13

Probes designed on Mon, 01 Mar 10 14:32:46 -0700

25 probes designed for target of length 554 (target too short for 48 probes)

Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC

ccagaagatgaagctgtcat, hlh-13_1, 1, 1, 45

ggaaactggtaaaccgccac, hlh-13_2, 2, 23, 55

agtgaggaataagagggaca, hlh-13_3, 3, 46, 45

atccataaagaagagctttg, hlh-13_4, 4, 68, 35

gcagtaatatgaatcatacg, hlh-13_5, 5, 92, 35

tttgtcgctcctcgggctcc, hlh-13_6, 6, 114, 65

ttcctctcacgaattgaagc, hlh-13_7, 7, 136, 45

cacattaatactacacattc, hlh-13_8, 8, 158, 30

aattgcggagctcaataaat, hlh-13_9, 9, 180, 35

tcataaggaaatgttggaat, hlh-13_10, 10, 202, 30

atcaattttagagagccgtt, hlh-13_11, 11, 224, 35

atgcaattgccaggttcaag, hlh-13_12, 12, 246, 45

acgtcatccaacatattgat, hlh-13_13, 13, 268, 35

agaatcttcgggtgttctca, hlh-13_14, 14, 290, 45

cacacttttgaatatactga, hlh-13_15, 15, 312, 30

tgacctgtgcgagccatatg, hlh-13_16, 16, 334, 55

actccacgctggtgcaccga, hlh-13_17, 17, 356, 65

gccgggctagcaaatcactt, hlh-13_18, 18, 378, 55

cgacgccacttgatccaatt, hlh-13_19, 19, 400, 50

ggcaatcggctcgattccaa, hlh-13_20, 20, 422, 55

acgcatacacagagtttgtt, hlh-13_21, 21, 444, 40

ggtattttgctttctgccgt, hlh-13_22, 22, 466, 45

ttcgtggaaaatacaattaa, hlh-13_23, 23, 488, 25

agatagaaaatcatgagttg, hlh-13_24, 24, 510, 30

tcagtatgtttattgaaatg, hlh-13_25, 25, 532, 25